RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 LDLRAP1Q5SW96 308 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 CELF3Q5SZQ8 465 aaKnown RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 FAM72AQ5TYM5 149 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 FAM72DQ6L9T8 149 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 SCIMPQ6UWF3 145 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 HFE2Q6ZVN8 426 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 FAM72BQ86X60 149 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 TTC39CQ8N584 583 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 DLG3Q92796 817 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 CRYL1Q9Y2S2 319 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 G3V2L1 256 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 CCDC166P0CW27 439 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 GFAPP14136 432 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 YWHAQP27348 245 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 OAZ1P54368 228 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 YWHAHQ04917 246 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 ZNF423Q2M1K9 1284 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 PPHLN1Q8NEY8 458 aaKnown RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 DNAJB14Q8TBM8 379 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 SLC35F5Q8WV83 523 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 TNIP3Q96KP6 325 aa16.09■□□□□ 0.17
MCF2L-232ENST00000535094 NXF3Q9H4D5 531 aaKnown RBP16.09■□□□□ 0.17
MCF2L-232ENST00000535094 NCF1BA6NI72 391 aaPredicted RBP16.08■□□□□ 0.17
MCF2L-232ENST00000535094 NCF1CA8MVU1 366 aaPredicted RBP16.08■□□□□ 0.17
MCF2L-232ENST00000535094 H6PDO95479 791 aa16.08■□□□□ 0.17
MCF2L-232ENST00000535094 NCF1P14598 390 aaPredicted RBP16.08■□□□□ 0.17
MCF2L-232ENST00000535094 CDH17Q12864 832 aa16.08■□□□□ 0.17
MCF2L-232ENST00000535094 TRIM25Q14258 630 aaKnown RBP16.08■□□□□ 0.17
MCF2L-232ENST00000535094 TWF2Q6IBS0 349 aaKnown RBP16.08■□□□□ 0.17
MCF2L-232ENST00000535094 ANKRD52Q8NB46 1076 aa16.08■□□□□ 0.17
MCF2L-232ENST00000535094 ALG9Q9H6U8 611 aa16.08■□□□□ 0.17
MCF2L-232ENST00000535094 C9IYK1 514 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 RECQL4O94761 1208 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 KPNA2P52292 529 aaKnown RBP16.08■□□□□ 0.16
MCF2L-232ENST00000535094 GJA9P57773 515 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 FOXD4Q12950 439 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-232ENST00000535094 UGP2Q16851 508 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 UTS2BQ765I0 119 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 ITFG2Q969R8 447 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 PABPC5Q96DU9 382 aaKnown RBP16.08■□□□□ 0.16
MCF2L-232ENST00000535094 GPRC5DQ9NZD1 345 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 UBA6A0AVT1 1052 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-232ENST00000535094 TGFB3P10600 412 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 ACADSBP45954 432 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 TAS2R39P59534 338 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 CCNA1P78396 465 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 CYP51A1Q16850 503 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 ARHGAP17Q68EM7 881 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 PARP8Q8N3A8 854 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 ATPAF2Q8N5M1 289 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 SPAG4Q9NPE6 437 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 VTI1BQ9UEU0 232 aa16.08■□□□□ 0.16
MCF2L-232ENST00000535094 GMNNO75496 209 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 CES1P23141 567 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 KLHL35Q6PF15 583 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 SLC26A9Q7LBE3 791 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 TMEM110Q86TL2 294 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 PCYOX1LQ8NBM8 494 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 MTG1Q9BT17 334 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-232ENST00000535094 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
MCF2L-232ENST00000535094 DRC3Q9H069 523 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 CLK4Q9HAZ1 481 aaKnown RBP16.07■□□□□ 0.16
MCF2L-232ENST00000535094 MRPL40Q9NQ50 206 aaKnown RBP16.07■□□□□ 0.16
MCF2L-232ENST00000535094 AHSGP02765 367 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 SNRPB2P08579 225 aaKnown RBP16.07■□□□□ 0.16
MCF2L-232ENST00000535094 CYP2C8P10632 490 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-232ENST00000535094 DPP6P42658 865 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 INPP5AQ14642 412 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 ADRM1Q16186 407 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 PIGGQ5H8A4 983 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 OR52K2Q8NGK3 314 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 RTP4Q96DX8 246 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 PLEKHG4BQ96PX9 1271 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 PIGVQ9NUD9 493 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 SLCO1B7G3V0H7 640 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 J3QRK9 145 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 GNGT2O14610 69 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 PCNAP12004 261 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 CHRNA4P43681 627 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 IKBKEQ14164 716 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 VPS26BQ4G0F5 336 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 NOMO2Q5JPE7 1267 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 ZYG11AQ6WRX3 759 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 CLEC4FQ8N1N0 589 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 DDHD1Q8NEL9 900 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 FBXL8Q96CD0 374 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 OSBPL11Q9BXB4 747 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 TKTL2Q9H0I9 626 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 EML4Q9HC35 981 aaKnown RBP16.07■□□□□ 0.16
MCF2L-232ENST00000535094 PNPLA3Q9NST1 481 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 OR12D3Q9UGF7 316 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 SLC2A6Q9UGQ3 507 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 CDC14AQ9UNH5 594 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 BTRCQ9Y297 605 aa16.07■□□□□ 0.16
MCF2L-232ENST00000535094 C7orf72A4D263 438 aa16.06■□□□□ 0.16
MCF2L-232ENST00000535094 DENRO43583 198 aaKnown RBP16.06■□□□□ 0.16
MCF2L-232ENST00000535094 TSPAN3O60637 253 aa16.06■□□□□ 0.16
MCF2L-232ENST00000535094 H2AFYO75367 372 aaKnown RBP16.06■□□□□ 0.16
MCF2L-232ENST00000535094 AP2A1O95782 977 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms