RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 SLC30A5Q8TAD4 765 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SCUBE2Q9NQ36 999 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 A0A0D9SEW6 157 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 RFPL3O75679 317 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 CAPNS1P04632 268 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 CTSLP07711 333 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 KCNA4P22459 653 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 ZBED6P86452 979 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 C15orf59Q2T9L4 293 aaPredicted RBP10.56□□□□□ -0.72
CSDE1-217ENST00000534699 ARSIQ5FYB1 569 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 RWDD4Q6NW29 188 aaKnown RBP10.56□□□□□ -0.72
CSDE1-217ENST00000534699 BRAT1Q6PJG6 821 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 PDCD7Q8N8D1 485 aaKnown RBP10.56□□□□□ -0.72
CSDE1-217ENST00000534699 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 AMACRQ9UHK6 382 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.56□□□□□ -0.724e-11■□□□□ 9.7
CSDE1-217ENST00000534699 A0A1W2PQU0 124 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 FPGTO14772 594 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 LEFTY1O75610 366 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 CD160O95971 181 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 SERPING1P05155 500 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 CKMT2P17540 419 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 CES1P23141 567 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 PBX1P40424 430 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
CSDE1-217ENST00000534699 TPI1P60174 286 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 HNRNPKP61978 463 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSDE1-217ENST00000534699 KLHL30Q0D2K2 578 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 SHBQ15464 509 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 GDPD4Q6W3E5 623 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 TFAP2DQ7Z6R9 452 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 VSIG1Q86XK7 387 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 SLC17A9Q9BYT1 436 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 LRRC19Q9H756 370 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 IL21RQ9HBE5 538 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 NLGN3Q9NZ94 848 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 SALL4Q9UJQ4 1053 aa10.56□□□□□ -0.72
CSDE1-217ENST00000534699 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.55□□□□□ -0.72
CSDE1-217ENST00000534699 RASA4BC9J798 803 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 H3BRJ5 948 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 AREL1O15033 823 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 RASA4O43374 803 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 CBFA2T2O43439 604 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 PRAMEF11O60813 436 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 MT-CO1P00395 513 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 EPHB2P29323 1055 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 HNRNPH3P31942 346 aaKnown RBP10.55□□□□□ -0.72
CSDE1-217ENST00000534699 PPP2CBP62714 309 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 PPP2CAP67775 309 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 IL10RBQ08334 325 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 BBS5Q8N3I7 341 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 CCDC185Q8N715 623 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 GLMNQ92990 594 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 CNDP2Q96KP4 475 aaKnown RBP10.55□□□□□ -0.72
CSDE1-217ENST00000534699 MCEEQ96PE7 176 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 EBF2Q9HAK2 575 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 SEPT11Q9NVA2 429 aaKnown RBP10.55□□□□□ -0.72
CSDE1-217ENST00000534699 TOR4AQ9NXH8 423 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 UBA2Q9UBT2 640 aaPredicted RBP10.55□□□□□ -0.72
CSDE1-217ENST00000534699 DNPEPQ9ULA0 475 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 CAPN11Q9UMQ6 739 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 LRRC53A6NM62 1247 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 ZNF487B1APH4 448 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 PRPSAP2O60256 369 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 SERPINC1P01008 464 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 VAV1P15498 845 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 RRM1P23921 792 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 PSMA2P25787 234 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 TEAD1P28347 426 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 POLR2LP62875 67 aaKnown RBP10.55□□□□□ -0.72
CSDE1-217ENST00000534699 SGCGQ13326 291 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 CDO1Q16878 200 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 LVRNQ6Q4G3 990 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 OR4C6Q8NH72 309 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 FAM71BQ8TC56 605 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 PDFQ9HBH1 243 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 FSCN3Q9NQT6 498 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 IP6K2Q9UHH9 426 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 AP4E1Q9UPM8 1137 aa10.55□□□□□ -0.72
CSDE1-217ENST00000534699 C16orf96A6NNT2 1141 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 GOLGA6L19H0YKK7 550 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 SMAD6O43541 496 aaKnown RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 BUB1O43683 1085 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 HYAL3O43820 417 aaPredicted RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 THEGLP0DJG4 465 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 ACADVLP49748 655 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 BLKP51451 505 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 AP1S1P61966 158 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 SPATS2Q86XZ4 545 aaKnown RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 OR6C4Q8NGE1 309 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 ZCCHC14Q8WYQ9 949 aaKnown RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 HAUS4Q9H6D7 363 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 ZWILCHQ9H900 591 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 PLXNB3Q9ULL4 1909 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 FAM47DPA6NHR8 397 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 EEF2KO00418 725 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms