RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 F11P03951 625 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 ADH1AP07327 375 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 RHOCP08134 193 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 SERPINF2P08697 491 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 MBL2P11226 248 aaPredicted RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 MAGEA9P43362 315 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 OXCT1P55809 520 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 CDK18Q07002 472 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 THOC5Q13769 683 aaKnown RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 PDE1CQ14123 709 aaPredicted RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 IL31Q6EBC2 164 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 FSTL4Q6MZW2 842 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 OTOAQ7RTW8 1153 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 CIR1Q86X95 450 aaPredicted RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 NUDCD3Q8IVD9 361 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 ELMOD1Q8N336 334 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 ARMC2Q8NEN0 867 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 ARRDC2Q8TBH0 407 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 SREK1Q8WXA9 508 aaKnown RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 C7orf26Q96N11 449 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 PSKH2Q96QS6 385 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 GPR22Q99680 433 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 SLCO1B3Q9NPD5 702 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 SNX15Q9NRS6 342 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 IARS2Q9NSE4 1012 aaKnown RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 UBA2Q9UBT2 640 aaPredicted RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 LSM7Q9UK45 103 aaKnown RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 AGO1Q9UL18 857 aaKnown RBP13.56□□□□□ -0.24
BEST1-208ENST00000534553 RIMKLBQ9ULI2 386 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 LZTS1Q9Y250 596 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 ANKRD6Q9Y2G4 727 aa13.56□□□□□ -0.24
BEST1-208ENST00000534553 ZBBXA8MT70 800 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 H3BNC9 293 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 FGBP02675 491 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 LRG1P02750 347 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 APOA4P06727 396 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 BPGMP07738 259 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 MMP2P08253 660 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 ACVRL1P37023 503 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 ARCN1P48444 511 aaKnown RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 RFWD3Q6PCD5 774 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 PSRC1Q6PGN9 363 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 PTPRN2Q92932 1015 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 E2F7Q96AV8 911 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 IFT43Q96FT9 208 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 VPS39Q96JC1 886 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 TSNARE1Q96NA8 513 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 SIKE1Q9BRV8 207 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 ACE2Q9BYF1 805 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 IRAK3Q9Y616 596 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 WDR91A4D1P6 747 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 C1RP00736 705 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 KLKB1P03952 638 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 ACRP10323 421 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 HSPA8P11142 646 aaKnown RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 COL6A2P12110 1019 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 CDC25CP30307 473 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 SKIV2L2P42285 1042 aaKnown RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 DSC2Q02487 901 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 ACTN3Q08043 901 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 PCSK7Q16549 785 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 TSTD2Q5T7W7 516 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 OTOP2Q7RTS6 562 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 TMCO2Q7Z6W1 182 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 CFAP52Q8N1V2 620 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.55□□□□□ -0.24
BEST1-208ENST00000534553 HJURPQ8NCD3 748 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 AGAP2Q99490 1192 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 SEMA3CQ99985 751 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 CINPQ9BW66 212 aaPredicted RBP13.55□□□□□ -0.24
BEST1-208ENST00000534553 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 RNF38Q9H0F5 515 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 SLC12A4Q9UP95 1085 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 RWDD3Q9Y3V2 267 aa13.55□□□□□ -0.24
BEST1-208ENST00000534553 C2orf78A6NCI8 922 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 SLC7A4O43246 635 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 TGM5O43548 720 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 PLIN3O60664 434 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 VAPBO95292 243 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 FGF19O95750 216 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
BEST1-208ENST00000534553 CNPP09543 421 aaKnown RBP13.54□□□□□ -0.24
BEST1-208ENST00000534553 GRK2P25098 689 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 MAXP61244 160 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 RPS24P62847 133 aaKnown RBP13.54□□□□□ -0.24
BEST1-208ENST00000534553 SMAD3P84022 425 aaKnown RBP13.54□□□□□ -0.24
BEST1-208ENST00000534553 TMPRSS15P98073 1019 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 FPGSQ05932 587 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 TAF1BQ53T94 588 aaPredicted RBP13.54□□□□□ -0.24
BEST1-208ENST00000534553 RALGPS1Q5JS13 557 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 TMEM150AQ86TG1 271 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms