RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ARHGAP12Q8IWW6 846 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3Q8IZP1 549 aaPredicted RBP16.09■□□□□ 0.17
TSKU-204ENST00000533752 KCTD6Q8NC69 237 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 IMPACTQ9P2X3 320 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 ACTL7AQ9Y615 435 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 CACNA1AO00555 2505 aa16.08■□□□□ 0.17
TSKU-204ENST00000533752 A0A1W2PPC4 97 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 TMEM110-MUSTN1A8MSY1 372 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 C10orf142B7Z368 130 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 KRIT1O00522 736 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 AMPD1P23109 780 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 SLC1A1P43005 524 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 GRIA4P48058 902 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 RACK1P63244 317 aaKnown RBP16.08■□□□□ 0.16
TSKU-204ENST00000533752 IL10RBQ08334 325 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 DPYSL3Q14195 570 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 MYLK3Q32MK0 819 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 ZFYVE27Q5T4F4 411 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 TMCO4Q5TGY1 634 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 ZSCAN30Q86W11 494 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 LRRC49Q8IUZ0 686 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 C1orf216Q8TAB5 229 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 SKA1Q96BD8 255 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 ZNF599Q96NL3 588 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 CALN1Q9BXU9 219 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 MFHAS1Q9Y4C4 1052 aa16.08■□□□□ 0.16
TSKU-204ENST00000533752 PLK4O00444 970 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 LATO43561 262 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 PALMO75781 387 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 MAPK8P45983 427 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 ARSEP51690 589 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 HADHBP55084 474 aaKnown RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 TAS2R40P59535 323 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 GRIK2Q13002 908 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 SETMARQ53H47 684 aaPredicted RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 ZNF805Q5CZA5 627 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 ATXN7L2Q5T6C5 722 aaPredicted RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 LRRC38Q5VT99 294 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 FBXL19Q6PCT2 694 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 ERMP1Q7Z2K6 904 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 DGLUCYQ7Z3D6 616 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 PRPF39Q86UA1 669 aaKnown RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 VSIG1Q86XK7 387 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 ATPAF2Q8N5M1 289 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 RAB7BQ96AH8 199 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 ARRDC3Q96B67 414 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 CALR3Q96L12 384 aaKnown RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 CINPQ9BW66 212 aaPredicted RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 GTPBP2Q9BX10 602 aaKnown RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 TM9SF3Q9HD45 589 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 LHX3Q9UBR4 397 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 IPO11Q9UI26 975 aaKnown RBP16.07■□□□□ 0.16
TSKU-204ENST00000533752 DMTF1Q9Y222 760 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 PCDHA13Q9Y5I0 950 aa16.07■□□□□ 0.16
TSKU-204ENST00000533752 PCDH15Q96QU1 1955 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 A0A0A6YYK5 440 aaPredicted RBP16.06■□□□□ 0.16
TSKU-204ENST00000533752 C4orf47A7E2U8 309 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 ZNF487B1APH4 448 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 J3KR12 359 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 CDX4O14627 284 aaPredicted RBP16.06■□□□□ 0.16
TSKU-204ENST00000533752 AP1G1O43747 822 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 NDUFA10O95299 355 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 CER1O95813 267 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 UGT2B4P06133 528 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 ADRB3P13945 408 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 HSPA9P38646 679 aaKnown RBP16.06■□□□□ 0.16
TSKU-204ENST00000533752 NOP2P46087 812 aaKnown RBP16.06■□□□□ 0.16
TSKU-204ENST00000533752 RENBPP51606 427 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 CYTH1Q15438 398 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 SLC45A4Q5BKX6 768 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 GDPD4Q6W3E5 623 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 ADAT2Q7Z6V5 191 aaKnown RBP16.06■□□□□ 0.16
TSKU-204ENST00000533752 BBS5Q8N3I7 341 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 OR6K2Q8NGY2 324 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 NSMCE1Q8WV22 266 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 FAF2Q96CS3 445 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 TUBGCP5Q96RT8 1024 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 ORAI3Q9BRQ5 295 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
TSKU-204ENST00000533752 SEPT3Q9UH03 358 aa16.06■□□□□ 0.16
TSKU-204ENST00000533752 EPN1Q9Y6I3 576 aaPredicted RBP16.06■□□□□ 0.16
TSKU-204ENST00000533752 SOWAHDA6NJG2 315 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 SPOPO43791 374 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 OPHN1O60890 802 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 CD48P09326 243 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 IL4RP24394 825 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 CSNK1DP48730 415 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 SUOXP51687 545 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 TAS2R38P59533 333 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 PPP2CBP62714 309 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 PPP2CAP67775 309 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 ODF2Q5BJF6 829 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 ANKRD20A8PQ5CZ79 823 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 NAPEPLDQ6IQ20 393 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 KIAA1161Q6NSJ0 714 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 PARS2Q7L3T8 475 aaKnown RBP16.05■□□□□ 0.16
TSKU-204ENST00000533752 CPNE8Q86YQ8 564 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 RHOT1Q8IXI2 618 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 TXLNBQ8N3L3 684 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms