RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CALN1Q9BXU9 219 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 HDAC8Q9BY41 377 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 TRIM7Q9C029 511 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 KLC2Q9H0B6 622 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 RETREG1Q9H6L5 497 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 NOL6Q9H6R4 1146 aaKnown RBP10.62□□□□□ -0.71
CAPN1-225ENST00000533704 AIPL1Q9NZN9 384 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 AP4E1Q9UPM8 1137 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 MSRB2Q9Y3D2 182 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 COL5A1P20908 1838 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 ZSCAN5CA6NGD5 496 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 C16orf96A6NNT2 1141 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 C10orf142B7Z368 130 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 EEF2KO00418 725 aaKnown RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 YKT6O15498 198 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 FGF10O15520 208 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 DAPK3O43293 454 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 MAGEC1O60732 1142 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 SDC3O75056 442 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 TMCC1O94876 653 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 IGSF6O95976 241 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 GSRP00390 522 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 UGT2B4P06133 528 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 THEGLP0DJG4 465 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 HNRNPA2B1P22626 353 aaKnown RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 EPHA8P29322 1005 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 PRKCIP41743 596 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 AIF1P55008 147 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 CLDN2P57739 230 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 RHOAP61586 193 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 BNIP3Q12983 259 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 SHBQ15464 509 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 CA9Q16790 459 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 ZNF284Q2VY69 593 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 PPP6R3Q5H9R7 873 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 LRRC73Q5JTD7 316 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 PLEKHA7Q6IQ23 1121 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 NEK5Q6P3R8 708 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 DBX2Q6ZNG2 339 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 PTAR1Q7Z6K3 402 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 GLRX5Q86SX6 157 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 SPATS2Q86XZ4 545 aaKnown RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 OXR1Q8N573 874 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 OR2AP1Q8NGE2 309 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 ZCCHC14Q8WYQ9 949 aaKnown RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 GATA6Q92908 595 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 ISG20Q96AZ6 181 aaKnown RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 EXOC2Q96KP1 924 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 GDAP1L1Q96MZ0 367 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 KLHL32Q96NJ5 620 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 PEBP4Q96S96 227 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 SNRNP25Q9BV90 132 aaKnown RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 EDEM3Q9BZQ6 932 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 TTYH3Q9C0H2 523 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 ZFR2Q9UPR6 939 aaKnown RBP10.61□□□□□ -0.71
CAPN1-225ENST00000533704 ITM2BQ9Y287 266 aa10.61□□□□□ -0.71
CAPN1-225ENST00000533704 FRYQ5TBA9 3013 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 ACACAQ13085 2346 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 TMEM191CA6NGB0 347 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 TNFSF14O43557 240 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 PRPSAP2O60256 369 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 POP4O95707 220 aaKnown RBP10.6□□□□□ -0.71
CAPN1-225ENST00000533704 LDOC1O95751 146 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-225ENST00000533704 GZMAP12544 262 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 MIPP30301 263 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 ABL2P42684 1182 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 YBEYP58557 167 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-225ENST00000533704 RPS21P63220 83 aaKnown RBP10.6□□□□□ -0.71
CAPN1-225ENST00000533704 RAD51Q06609 339 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 NFKBIBQ15653 356 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 MYLK3Q32MK0 819 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 PARP15Q460N3 678 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 ZNF805Q5CZA5 627 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 KIAA1161Q6NSJ0 714 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 VPS36Q86VN1 386 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 IQCHQ86VS3 1027 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 MARCH9Q86YJ5 346 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 OR13H1Q8NG92 308 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 SAP25Q8TEE9 199 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 TRIM11Q96F44 468 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 FEM1CQ96JP0 617 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 CNDP2Q96KP4 475 aaKnown RBP10.6□□□□□ -0.71
CAPN1-225ENST00000533704 KCTD15Q96SI1 283 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-225ENST00000533704 NCAPGQ9BPX3 1015 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 IFNKQ9P0W0 207 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 UBA2Q9UBT2 640 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-225ENST00000533704 GGT7Q9UJ14 662 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 ZMIZ1Q9ULJ6 1067 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 FADS3Q9Y5Q0 445 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 SCINQ9Y6U3 715 aa10.6□□□□□ -0.71
CAPN1-225ENST00000533704 IGLON5A6NGN9 336 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 WASH4PA8MWX3 477 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 DFFAO00273 331 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 ENC1O14682 589 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 INSIG1O15503 277 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 PAK4O96013 591 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-225ENST00000533704 MYBL1P10243 752 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 PTMSP20962 102 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms