RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ABL2P42684 1182 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 PCBP4P57723 403 aaKnown RBP18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 SLC20A2Q08357 652 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 CDKN3Q16667 212 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 ACBD5Q5T8D3 534 aaPredicted RBP18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 KLHDC7AQ5VTJ3 777 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 NAA35Q5VZE5 725 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 LEKR1Q6ZMV7 388 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 PHLDB2Q86SQ0 1253 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 PARGQ86W56 976 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 DCP2Q8IU60 420 aaKnown RBP18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 RYBPQ8N488 228 aaPredicted RBP18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 FAM181AQ8N9Y4 354 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 FAM174AQ8TBP5 190 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 MAPK15Q8TD08 544 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 KLF6Q99612 283 aaPredicted RBP18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 MAGEB5Q9BZ81 275 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 ABCG4Q9H172 646 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 GTF3C3Q9Y5Q9 886 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 PIEZO2Q9H5I5 2752 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 TEX51A0A1B0GUA7 166 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 PES1O00541 588 aaKnown RBP18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 SPINT1O43278 529 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 AP1G1O43747 822 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 LSM8O95777 96 aaKnown RBP18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 GP1BAP07359 652 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 TGM2P21980 687 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 RABIFP47224 123 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 UBE2HP62256 183 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 NOMO3P69849 1222 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 PDE1CQ14123 709 aaPredicted RBP18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 CDO1Q16878 200 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 C15orf59Q2T9L4 293 aaPredicted RBP18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 DEFB133Q30KQ1 61 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 GUSBP11Q6P575 273 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 PCSK4Q6UW60 755 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 FAM114A1Q8IWE2 563 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 ZNF248Q8NDW4 579 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 EPS8L1Q8TE68 723 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 HIC2Q96JB3 615 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 ZNF578Q96N58 590 aaPredicted RBP18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 DUSP23Q9BVJ7 150 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 PPARGC1AQ9UBK2 798 aaKnown RBP18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 IPO11Q9UI26 975 aaKnown RBP18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 DNAI1Q9UI46 699 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 COL6A6A6NMZ7 2263 aa18.74■□□□□ 0.59
SSSCA1-206ENST00000531405 CPED1A4D0V7 1026 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 C16orf96A6NNT2 1141 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 FAM72CH0Y354 149 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 H3BM21 787 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 FPGTO14772 594 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 AQP9O43315 295 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 JUNDP17535 347 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 DUSP3P51452 185 aaPredicted RBP18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 SGCGQ13326 291 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 DPCR1Q3MIW9 517 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 LRRC73Q5JTD7 316 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 FAM72AQ5TYM5 149 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 FAM72DQ6L9T8 149 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 RWDD4Q6NW29 188 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 ZCCHC8Q6NZY4 707 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 CRTC1Q6UUV9 634 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 FAM72BQ86X60 149 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 LMX1AQ8TE12 382 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 SLC20A1Q8WUM9 679 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 VOPP1Q96AW1 172 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 C1QTNF2Q9BXJ5 285 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 TCEAL2Q9H3H9 227 aaPredicted RBP18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 USP29Q9HBJ7 922 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 CPNE5Q9HCH3 593 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 OR12D3Q9UGF7 316 aa18.73■□□□□ 0.59
SSSCA1-206ENST00000531405 F8VZ95 297 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 KRIT1O00522 736 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 NEMP1O14524 444 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 CASC3O15234 703 aaKnown RBP18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 GJB6O95452 261 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 UGT2B4P06133 528 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 UCHL3P15374 230 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 LSSP48449 732 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 EIF2B5Q13144 721 aaKnown RBP18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 ZNF805Q5CZA5 627 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 C3orf38Q5JPI3 329 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 MANEALQ5VSG8 457 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 EFL1Q7Z2Z2 1120 aaKnown RBP18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 NLRP14Q86W24 1093 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 RBFAQ8N0V3 343 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 ZNF843Q8N446 348 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 ARHGEF2Q92974 986 aaKnown RBP18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 ISG20Q96AZ6 181 aaKnown RBP18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 LENG8Q96PV6 779 aaPredicted RBP18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 POLR1BQ9H9Y6 1135 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 ASCL3Q9NQ33 180 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 EVA1BQ9NVM1 165 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 TMEM51Q9NW97 253 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 SATB2Q9UPW6 733 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 NEU3Q9UQ49 428 aa18.72■□□□□ 0.59
SSSCA1-206ENST00000531405 A0A1W2PNU3 283 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 TSPAN6O43657 245 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms