RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 A6NNZ2 444 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 CDRT15L2A8MXV6 281 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 EFSO43281 561 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 THAP12O43422 761 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 CLDN11O75508 207 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 DAB1O75553 588 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 ZMPSTE24O75844 475 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 CD160O95971 181 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 CSF2P04141 144 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 TUBB4AP04350 444 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 ZNF18P17022 549 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 GNA15P30679 374 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 MARSP56192 900 aaKnown RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 VAC14Q08AM6 782 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 NME3Q13232 169 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 ZNF177Q13360 481 aaPredicted RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 CCDC40Q4G0X9 1142 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 PTPN20Q4JDL3 420 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 ARSIQ5FYB1 569 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 TRNP1Q6NT89 227 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 C22orf39Q6P5X5 142 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 CRTC1Q6UUV9 634 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 KYAT3Q6YP21 454 aaKnown RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 DPY19L3Q6ZPD9 716 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 ERN2Q76MJ5 926 aaKnown RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 RBFAQ8N0V3 343 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 CCDC112Q8NEF3 446 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 MAPK15Q8TD08 544 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC46A1Q96NT5 459 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 MED15Q96RN5 788 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 TRIM62Q9BVG3 475 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 HDAC8Q9BY41 377 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 GTPBP4Q9BZE4 634 aaKnown RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 TCEAL2Q9H3H9 227 aaPredicted RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 UBE2TQ9NPD8 197 aaPredicted RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 ASNSD1Q9NWL6 643 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 MPP6Q9NZW5 540 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 MAN1B1Q9UKM7 699 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 NBPF19A0A087WUL8 3843 aa9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 K7ENP7 123 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 PSMA7O14818 248 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 CCP110O43303 1012 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 CTIFO43310 598 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 HSF2BPO75031 334 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 GCATO75600 419 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 LEFTY1O75610 366 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ENDOD1O94919 500 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 PCDH8O95206 1070 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 PAK4O96013 591 aaPredicted RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 RHOCP08134 193 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 GLI1P08151 1106 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC2A3P11169 496 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ADRB3P13945 408 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 AKT2P31751 481 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ABL2P42684 1182 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 CXCR3P49682 368 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 UCNP55089 124 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 CDH4P55283 916 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 OXCT1P55809 520 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ARF5P84085 180 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 CDK17Q00537 523 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 NFATC3Q12968 1075 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 EIF2B5Q13144 721 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 CLN3Q13286 438 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 SERINC3Q13530 473 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 UBAP2LQ14157 1087 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 DEFB133Q30KQ1 61 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 BROXQ5VW32 411 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 KLHL10Q6JEL2 608 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ZCCHC8Q6NZY4 707 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 INO80CQ6PI98 192 aaPredicted RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 TRIM65Q6PJ69 517 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 PARS2Q7L3T8 475 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC26A9Q7LBE3 791 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 EFL1Q7Z2Z2 1120 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 PTAR1Q7Z6K3 402 aaPredicted RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 TFAP2DQ7Z6R9 452 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 LSMEM2Q8N112 164 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 DCAF4L2Q8NA75 395 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ATP11CQ8NB49 1132 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 C1orf131Q8NDD1 294 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 OR7D4Q8NG98 312 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 RNF34Q969K3 372 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 NT5C3BQ969T7 300 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 DHTKD1Q96HY7 919 aaPredicted RBP9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 PPP1R13BQ96KQ4 1090 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 NPY6RQ99463 290 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 C1QTNF2Q9BXJ5 285 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC17A9Q9BYT1 436 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 DPH1Q9BZG8 443 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 SIK2Q9H0K1 926 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 MUC3BQ9H195 1237 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ARHGEF38Q9NXL2 777 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 IL36AQ9UHA7 158 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ITM2BQ9Y287 266 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms