RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 NOMO3P69849 1222 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 DPCR1Q3MIW9 517 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 C3orf38Q5JPI3 329 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 MIIPQ5JXC2 388 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 KLHDC7AQ5VTJ3 777 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 ZSCAN30Q86W11 494 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 EPS8L1Q8TE68 723 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 ZNF578Q96N58 590 aaPredicted RBP16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 DNAI1Q9UI46 699 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 GGT7Q9UJ14 662 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 HS3ST3A1Q9Y663 406 aa16.09■□□□□ 0.17
CHMP4A-204ENST00000530996 SPTY2D1-AS1A0A0U1RR47 76 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 C16orf96A6NNT2 1141 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 TSPAN6O43657 245 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 AP1G1O43747 822 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 RAMP2O60895 175 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 ZNF821O75541 412 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 CSF2P04141 144 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 GIMD1P0DJR0 217 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 ABL2P42684 1182 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 MAPKAPK2P49137 400 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 C15orf59Q2T9L4 293 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 TAF1BQ53T94 588 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 LRRC73Q5JTD7 316 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 GUSBP11Q6P575 273 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 CRTC1Q6UUV9 634 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 EFL1Q7Z2Z2 1120 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 LSMEM2Q8N112 164 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 SLC20A1Q8WUM9 679 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 KCNE4Q8WWG9 221 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 RAB7BQ96AH8 199 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 TBC1D31Q96DN5 1066 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 BMFQ96LC9 184 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 IL12RB2Q99665 862 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 C11orf70Q9BRQ4 267 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 CLSTN2Q9H4D0 955 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 POLR1BQ9H9Y6 1135 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 THSD1Q9NS62 852 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 WDR70Q9NW82 654 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 TAB2Q9NYJ8 693 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 NCKIPSDQ9NZQ3 722 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 PPARGC1AQ9UBK2 798 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 ZNF212Q9UDV6 495 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 OR12D3Q9UGF7 316 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 APOBEC3BQ9UH17 382 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 TMEM59LQ9UK28 342 aa16.08■□□□□ 0.16
CHMP4A-204ENST00000530996 LY6G6EA0A0G2JKS1 128 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 TK2O00142 265 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 MUSKO15146 869 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 GFPT2O94808 682 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 ZIC2O95409 532 aaPredicted RBP16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 UCNP55089 124 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 TMPRSS3P57727 454 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 SNRPD1P62314 119 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 NR0B2Q15466 257 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 ZNF805Q5CZA5 627 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 ATXN7L2Q5T6C5 722 aaPredicted RBP16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 CDCP2Q5VXM1 449 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 FOXR1Q6PIV2 292 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 RBFAQ8N0V3 343 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 FAM181AQ8N9Y4 354 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 DENND6BQ8NEG7 585 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 OR2AP1Q8NGE2 309 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 ARHGEF2Q92974 986 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 ARHGEF26Q96DR7 871 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 C1QTNF7Q9BXJ2 289 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 U3KQA8 63 aa16.07■□□□□ 0.16
CHMP4A-204ENST00000530996 C1QL1O75973 258 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 GSRP00390 522 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 TPM2P07951 284 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 RHOQP17081 205 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 XPAP23025 273 aaPredicted RBP16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 ERCC5P28715 1186 aaPredicted RBP16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 RBMS1P29558 406 aaKnown RBP16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 PTK2BQ14289 1009 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 RAB6CQ53S08 254 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 ARHGAP40Q5TG30 622 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 PHACTR4Q8IZ21 702 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 CXorf40AQ8TE69 158 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 BTN2A2Q8WVV5 523 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 RXFP2Q8WXD0 754 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 GLMNQ92990 594 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 ISG20Q96AZ6 181 aaKnown RBP16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 GDAP1L1Q96MZ0 367 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 KLHL32Q96NJ5 620 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 NCAPGQ9BPX3 1015 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 C1QTNF2Q9BXJ5 285 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 OSBPL1AQ9BXW6 950 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 RAB6CQ9H0N0 254 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 GPR27Q9NS67 375 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 NDFIP2Q9NV92 336 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 TMEM248Q9NWD8 314 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 SPASTQ9UBP0 616 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 SATB2Q9UPW6 733 aa16.06■□□□□ 0.16
CHMP4A-204ENST00000530996 KLK10O43240 276 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 BUB1O43683 1085 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms