RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 NPC1O15118 1278 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 ITGAVP06756 1048 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 RBP3P10745 1247 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 NDUFV2P19404 249 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 OR1E1P30953 314 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 GARSP41250 739 aaKnown RBP15.88■□□□□ 0.13
CTSB-219ENST00000530640 ATXN3P54252 364 aaPredicted RBP15.88■□□□□ 0.13
CTSB-219ENST00000530640 PDK1Q15118 436 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 PARP15Q460N3 678 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 SLC45A4Q5BKX6 768 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 CCDC137Q6PK04 289 aaKnown RBP15.88■□□□□ 0.13
CTSB-219ENST00000530640 SETD3Q86TU7 594 aaPredicted RBP15.88■□□□□ 0.13
CTSB-219ENST00000530640 HDDC3Q8N4P3 179 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 NETO2Q8NC67 525 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 OR52K2Q8NGK3 314 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 CELF6Q96J87 481 aaKnown RBP15.88■□□□□ 0.13
CTSB-219ENST00000530640 RUNDC3BQ96NL0 473 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 KRT12Q99456 494 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 THAP10Q9P2Z0 257 aaPredicted RBP15.88■□□□□ 0.13
CTSB-219ENST00000530640 GON4LQ3T8J9 2241 aa15.88■□□□□ 0.13
CTSB-219ENST00000530640 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 EFCAB8A8MWE9 144 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 HACD1B0YJ81 288 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 WASH3PC4AMC7 463 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 GIPC1O14908 333 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 PPP1R12AO14974 1030 aaPredicted RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 RAMP2O60895 175 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 SYPP08247 313 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 SERPINF2P08697 491 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ENGP17813 658 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 MX2P20592 715 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 HLA-FP30511 346 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 IL12RB1P42701 662 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 YBEYP58557 167 aaPredicted RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZNF33AQ06730 810 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 PPIDQ08752 370 aaKnown RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 UAP1L1Q3KQV9 507 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 C6orf118Q5T5N4 469 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZNF783Q6ZMS7 281 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZC3H18Q86VM9 953 aaKnown RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 CDKL3Q8IVW4 592 aaPredicted RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 KLHL7Q8IXQ5 586 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 TMEFF1Q8IYR6 380 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 FRMD1Q8N878 549 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 WFDC5Q8TCV5 224 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 WFIKKN2Q8TEU8 576 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 RTP4Q96DX8 246 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 SLC39A8Q9C0K1 460 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 BRD8Q9H0E9 1235 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 CD248Q9HCU0 757 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ELOVL2Q9NXB9 296 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 DRG1Q9Y295 367 aaKnown RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 NEUROG3Q9Y4Z2 214 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 FAM208BQ5VWN6 2430 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 PI4KAP42356 2102 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ASCC3Q8N3C0 2202 aaKnown RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 ILVBLA1L0T0 632 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 RASA4BC9J798 803 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 RASA4O43374 803 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 VAV1P15498 845 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 PTGER3P43115 390 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 PTGIRP43119 386 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 KCNJ1P48048 391 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 SLC14A1Q13336 389 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZNF177Q13360 481 aaPredicted RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 SNX1Q13596 522 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 CDH18Q13634 790 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 DHX34Q14147 1143 aaKnown RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZNF234Q14588 700 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 KIAA1324Q6UXG2 1013 aaKnown RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 ARMCX6Q7L4S7 300 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 AHI1Q8N157 1196 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZNF557Q8N988 423 aaPredicted RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 TFB1MQ8WVM0 346 aaKnown RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 SORCS1Q8WY21 1168 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 HMCESQ96FZ2 354 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 LMLNQ96KR4 655 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 SCNM1Q9BWG6 230 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 MAGEH1Q9H213 219 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 TMEM74BQ9NUR3 256 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ABCB8Q9NUT2 735 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 SUSD2Q9UGT4 822 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 AMACRQ9UHK6 382 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 MBD1Q9UIS9 605 aaPredicted RBP15.87■□□□□ 0.13
CTSB-219ENST00000530640 GGA2Q9UJY4 613 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 ZMIZ1Q9ULJ6 1067 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 CYP8B1Q9UNU6 501 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 NEU2Q9Y3R4 380 aa15.87■□□□□ 0.13
CTSB-219ENST00000530640 MUC22E2RYF6 1773 aaPredicted RBP15.86■□□□□ 0.13
CTSB-219ENST00000530640 CFAP69A5D8W1 941 aa15.86■□□□□ 0.13
CTSB-219ENST00000530640 C1QTNF9BB2RNN3 333 aa15.86■□□□□ 0.13
CTSB-219ENST00000530640 RAD51CO43502 376 aa15.86■□□□□ 0.13
CTSB-219ENST00000530640 SYNCRIPO60506 623 aaKnown RBP15.86■□□□□ 0.13
CTSB-219ENST00000530640 OPHN1O60890 802 aa15.86■□□□□ 0.13
CTSB-219ENST00000530640 C1QTNF9P0C862 333 aa15.86■□□□□ 0.13
CTSB-219ENST00000530640 PABPC1P11940 636 aaKnown RBP15.86■□□□□ 0.13
CTSB-219ENST00000530640 DR1Q01658 176 aa15.86■□□□□ 0.13
CTSB-219ENST00000530640 RPL6Q02878 288 aaKnown RBP15.86■□□□□ 0.13
CTSB-219ENST00000530640 GNA12Q03113 381 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms