RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 M0QYT0 321 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 NPC1O15118 1278 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 TIMM44O43615 452 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 NDUFS2O75306 463 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 APOEP02649 317 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 MPOP05164 745 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 PABPC1P11940 636 aaKnown RBP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 MX2P20592 715 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 TACR2P21452 398 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 MMP8P22894 467 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CCR1P32246 355 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 FLT3P36888 993 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CD97P48960 835 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 RNASE9P60153 205 aaKnown RBP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 GABREP78334 506 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 PTP4A2Q12974 167 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF234Q14588 700 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 NR1I3Q14994 352 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 KIF19Q2TAC6 998 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 FSCBQ5H9T9 825 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 NAA35Q5VZE5 725 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 RAP1GAP2Q684P5 730 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 MBLAC2Q68D91 279 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 SDE2Q6IQ49 451 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CHST9Q7L1S5 443 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 ARCQ7LC44 396 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 BNIPLQ7Z465 357 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 IRF2BP2Q7Z5L9 587 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 ZSCAN30Q86W11 494 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CFAP52Q8N1V2 620 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 ATP6V0D2Q8N8Y2 350 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 HJURPQ8NCD3 748 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 WFIKKN2Q8TEU8 576 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 UCMAQ8WVF2 138 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 TRIM44Q96DX7 344 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 ERLEC1Q96DZ1 483 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 PGAP3Q96FM1 320 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CNDP2Q96KP4 475 aaKnown RBP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CIPCQ9C0C6 399 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 SLC6A17Q9H1V8 727 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CBX8Q9HC52 389 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 ANLNQ9NQW6 1124 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 THSD1Q9NS62 852 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 PIGVQ9NUD9 493 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 ABCB8Q9NUT2 735 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 RRN3Q9NYV6 651 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 COX16Q9P0S2 106 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 STIM2Q9P246 746 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 GGA2Q9UJY4 613 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 INTS6Q9UL03 887 aaKnown RBP8.7□□□□□ -1.02
SSBP3-212ENST00000528930 PCDHB1Q9Y5F3 818 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 SNX11Q9Y5W9 270 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 EFSO43281 561 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 ENDOD1O94919 500 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 LUC7L3O95232 432 aaKnown RBP8.69□□□□□ -1.02
SSBP3-212ENST00000528930 ADCY5O95622 1261 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 LDOC1O95751 146 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-212ENST00000528930 RNF224P0DH78 156 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 SLC2A3P11169 496 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 ABCB4P21439 1286 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 PRKCHP24723 683 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 LSSP48449 732 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CXCR3P49682 368 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 SULT1E1P49888 294 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 COPAP53621 1224 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CENPCQ03188 943 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 ARID5AQ03989 594 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 NME3Q13232 169 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 SLC25A52Q3SY17 297 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 FUT11Q495W5 492 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 C5orf22Q49AR2 442 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 ARTNQ5T4W7 220 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 FAM102AQ5T9C2 384 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-212ENST00000528930 FBXL22Q6P050 247 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 TRIM72Q6ZMU5 477 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 MMS22LQ6ZRQ5 1243 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 C14orf80Q86SX3 495 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 LUZP1Q86V48 1076 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CHSY1Q86X52 802 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 MFN1Q8IWA4 741 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 LGI2Q8N0V4 545 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 AHI1Q8N157 1196 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CARNMT1Q8N4J0 409 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF557Q8N988 423 aaPredicted RBP8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CADM4Q8NFZ8 388 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 SLC30A5Q8TAD4 765 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 SSC4DQ8WTU2 575 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CYB5D2Q8WUJ1 264 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 TTC17Q96AE7 1141 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 MOCOSQ96EN8 888 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 MYO19Q96H55 970 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 MRGPRX1Q96LB2 322 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 TBCBQ99426 244 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 AGPAT1Q99943 283 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 SYT11Q9BT88 431 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 TTYH3Q9C0H2 523 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 MKRN2Q9H000 416 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms