RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 HP1BP3Q5SSJ5 553 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-218ENST00000528877 MANEALQ5VSG8 457 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 DCAF12L1Q5VU92 463 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 TAF3Q5VWG9 929 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 NAA35Q5VZE5 725 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 ADAMTSL4Q6UY14 1074 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 ZNF783Q6ZMS7 281 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 MMS22LQ6ZRQ5 1243 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 SND1Q7KZF4 910 aaKnown RBP eCLIP7.25□□□□□ -1.25
ITGB1-218ENST00000528877 VN1R5Q7Z5H4 357 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 CIR1Q86X95 450 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-218ENST00000528877 PHF13Q86YI8 300 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-218ENST00000528877 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 CCNJLQ8IV13 435 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 ZNF366Q8N895 744 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 DCAF4L2Q8NA75 395 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 C3orf20Q8ND61 904 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 FRS2Q8WU20 508 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 IGSF8Q969P0 613 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 KLHDC7BQ96G42 594 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 RPRD1AQ96P16 312 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-218ENST00000528877 SPAG5Q96R06 1193 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 HAPLN3Q96S86 360 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 PPP1R9BQ96SB3 815 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 TBCBQ99426 244 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 FEM1AQ9BSK4 669 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 SYT11Q9BT88 431 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 GPR174Q9BXC1 333 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 NAT10Q9H0A0 1025 aaKnown RBP7.25□□□□□ -1.25
ITGB1-218ENST00000528877 TKTL2Q9H0I9 626 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 VPS16Q9H269 839 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 PDCL3Q9H2J4 239 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 RETREG1Q9H6L5 497 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 ZFYVE1Q9HBF4 777 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 SGK2Q9HBY8 427 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 ANLNQ9NQW6 1124 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 DCTN4Q9UJW0 460 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 WASF3Q9UPY6 502 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 NEU3Q9UQ49 428 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 HS3ST2Q9Y278 367 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-218ENST00000528877 IGF2RP11717 2491 aa7.25□□□□□ -1.25
ITGB1-218ENST00000528877 PI4KAP42356 2102 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 SYNJ2BP-COX16A0A087WUM0 186 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 A0A1W2PP55 124 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 TCRBV5S1A1TA0A578 114 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 C2CD4BA6NLJ0 364 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 TTC34A8MYJ7 566 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 RNASEH1O60930 286 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 ALX3O95076 343 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 SEMA4FO95754 770 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CALB1P05937 261 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 ACSL1P33121 698 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 NSFP46459 744 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 GRIA4P48058 902 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 STK19P49842 368 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 NOVA1P51513 510 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 AFF3P51826 1226 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 DEUP1Q05D60 604 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 SCAPQ12770 1279 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 GRIK2Q13002 908 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 HNRNPDQ14103 355 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CLEC16AQ2KHT3 1053 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 RNF219Q5W0B1 726 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 PPP1R2P3Q6NXS1 205 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 MON1BQ7L1V2 547 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 STRADAQ7RTN6 431 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CACUL1Q86Y37 369 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 APCDD1Q8J025 514 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 ZCCHC9Q8N567 271 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 MINDY1Q8N5J2 469 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 AOPEPQ8N6M6 819 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 NEK11Q8NG66 645 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 OR52K2Q8NGK3 314 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CPA5Q8WXQ8 436 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CENPIQ92674 756 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 RNF34Q969K3 372 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 ERLEC1Q96DZ1 483 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CFAP57Q96MR6 1250 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 ORAI3Q9BRQ5 295 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 FUCA2Q9BTY2 467 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 BTBD1Q9H0C5 482 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 WDCPQ9H6R7 721 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 LIN7BQ9HAP6 207 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 LATS2Q9NRM7 1088 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 METTL5Q9NRN9 209 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 KCNK4Q9NYG8 393 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 COX16Q9P0S2 106 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 PPARGC1AQ9UBK2 798 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 SERGEFQ9UGK8 458 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 VANGL2Q9ULK5 521 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CACNA1BQ00975 2339 aa7.24□□□□□ -1.25
ITGB1-218ENST00000528877 MAP1BP46821 2468 aaKnown RBP7.24□□□□□ -1.25
ITGB1-218ENST00000528877 CHD6Q8TD26 2715 aa7.23□□□□□ -1.25
ITGB1-218ENST00000528877 ASCC3Q8N3C0 2202 aaKnown RBP7.23□□□□□ -1.25
ITGB1-218ENST00000528877 DOCK4Q8N1I0 1966 aa7.23□□□□□ -1.25
ITGB1-218ENST00000528877 CHD5Q8TDI0 1954 aa7.23□□□□□ -1.25
ITGB1-218ENST00000528877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-218ENST00000528877 A0A1W2PQC6 194 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms