RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 TRIM55Q9BYV6 548 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 YIPF1Q9Y548 306 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 DENND4CQ5VZ89 1909 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 TRIM43BA6NCK2 446 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 VAPBO95292 243 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 SBK3P0C264 359 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 LINC00271P0C7V0 271 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 SKIV2L2P42285 1042 aaKnown RBP13.69□□□□□ -0.22
SEC16B-208ENST00000528461 NUMBP49757 651 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 SERPINB8P50452 374 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 PCSK7Q16549 785 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 SPDYAQ5MJ70 313 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 TPGS2Q68CL5 300 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 ALG1LQ6GMV1 187 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 TRIM43Q96BQ3 446 aaPredicted RBP13.69□□□□□ -0.22
SEC16B-208ENST00000528461 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 KLF16Q9BXK1 252 aaPredicted RBP13.69□□□□□ -0.22
SEC16B-208ENST00000528461 VPS45Q9NRW7 570 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 TMEM39AQ9NV64 488 aa13.69□□□□□ -0.22
SEC16B-208ENST00000528461 ZFP37Q9Y6Q3 630 aaPredicted RBP13.69□□□□□ -0.22
SEC16B-208ENST00000528461 G3V2L1 256 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 LILRB3O75022 631 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 C2P06681 752 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 KCNA4P22459 653 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 RPS24P62847 133 aaKnown RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 TMPRSS15P98073 1019 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 RAB33AQ14088 237 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 HECTD3Q5T447 861 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 FYB2Q5VWT5 728 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 MTDHQ86UE4 582 aaKnown RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 PDZD8Q8NEN9 1154 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 OR13J1Q8NGT2 312 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 CDK5RAP1Q96SZ6 601 aaKnown RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 TMEM120AQ9BXJ8 343 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 FSD1LQ9BXM9 530 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 RHOJQ9H4E5 214 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 SP110Q9HB58 689 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 DONSONQ9NYP3 566 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 TXNDC16Q9P2K2 825 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 COPG2Q9UBF2 871 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 MROH6A6NGR9 719 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 GREM1O60565 184 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 CLTBP09497 229 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 TROVE2P10155 538 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 ZXDBP98169 803 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 MPP1Q00013 466 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 CTBP1Q13363 440 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 KIAA0930Q6ICG6 404 aaPredicted RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 CLNKQ7Z7G1 428 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 C10orf107Q8IVU9 208 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 AUTS2Q8WXX7 1259 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 SLC7A6OSQ96CW6 309 aaPredicted RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 A0A096LPK6 155 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 ABHD14A-ACY1A0A1B0GW23 586 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 TIMM44O43615 452 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 DNAJC6O75061 913 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 DCTN3O75935 186 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 RFC2P35250 354 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 ELF3P78545 371 aaPredicted RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 MTA1Q13330 715 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 DENND1CQ8IV53 801 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 PPHLN1Q8NEY8 458 aaKnown RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 ADAMTS19Q8TE59 1207 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 UTP4Q969X6 686 aaKnown RBP13.68□□□□□ -0.22
SEC16B-208ENST00000528461 SORT1Q99523 831 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 CYP4F11Q9HBI6 524 aa13.68□□□□□ -0.22
SEC16B-208ENST00000528461 A0A0G2JND7 137 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 F5H5T6 163 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 AURKAO14965 403 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 MPOP05164 745 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 CSF2RAP15509 400 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
SEC16B-208ENST00000528461 TAF1BQ53T94 588 aaPredicted RBP13.67□□□□□ -0.22
SEC16B-208ENST00000528461 SIRPB2Q5JXA9 342 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 ARMC3Q5W041 872 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 ATG16L1Q676U5 607 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 FAM117BQ6P1L5 589 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 C2CD4AQ8NCU7 369 aaPredicted RBP13.67□□□□□ -0.22
SEC16B-208ENST00000528461 ZNF558Q96NG5 402 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 LYPLA1O75608 230 aaPredicted RBP13.67□□□□□ -0.22
SEC16B-208ENST00000528461 SLC35E2BP0CK96 405 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 MYL2P10916 166 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 GLDCP23378 1020 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 ETFBP38117 255 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 SLC1A2P43004 574 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 KIAA1841Q6NSI8 718 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 DDX53Q86TM3 631 aaKnown RBP13.67□□□□□ -0.22
SEC16B-208ENST00000528461 SPNS2Q8IVW8 549 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 CEP97Q8IW35 865 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 TNS4Q8IZW8 715 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 OR7D4Q8NG98 312 aa13.67□□□□□ -0.22
SEC16B-208ENST00000528461 FBXO6Q9NRD1 293 aaPredicted RBP13.67□□□□□ -0.22
SEC16B-208ENST00000528461 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
SEC16B-208ENST00000528461 HEY2Q9UBP5 337 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms