RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 KIF26BQ2KJY2 2108 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 A0A1W2PNU3 283 aaPredicted RBP23.99■■□□□ 1.43
CPSF1-202ENST00000527827 IGLON5A6NGN9 336 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 ERVH48-1M5A8F1 160 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 SPINT1O43278 529 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 CYP11B1P15538 503 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 ABL2P42684 1182 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 TMPRSS3P57727 454 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 DRAP1Q14919 205 aaPredicted RBP23.99■■□□□ 1.43
CPSF1-202ENST00000527827 CDKN3Q16667 212 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 ISXQ2M1V0 245 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 BROXQ5VW32 411 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 GUSBP11Q6P575 273 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 FAM131BQ86XD5 332 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 DRC7Q8IY82 874 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 VOPP1Q96AW1 172 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 PDCL3Q9H2J4 239 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 ZDHHC6Q9H6R6 413 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 HECAQ9UBI9 543 aaPredicted RBP23.99■■□□□ 1.43
CPSF1-202ENST00000527827 GGT7Q9UJ14 662 aa23.99■■□□□ 1.43
CPSF1-202ENST00000527827 COL6A6A6NMZ7 2263 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 H3BM21 787 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 GOLGA8SH3BPF8 625 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 FPGTO14772 594 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 AQP9O43315 295 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 GKP32189 559 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 UCNP55089 124 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 EIF2B5Q13144 721 aaKnown RBP23.98■■□□□ 1.43
CPSF1-202ENST00000527827 PDE1CQ14123 709 aaPredicted RBP23.98■■□□□ 1.43
CPSF1-202ENST00000527827 CAMK4Q16566 473 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 MAN2A1Q16706 1144 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 ZSCAN30Q86W11 494 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 KCNE4Q8WWG9 221 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 VCPIP1Q96JH7 1222 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 TM6SF2Q9BZW4 377 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 PPARGC1AQ9UBK2 798 aaKnown RBP23.98■■□□□ 1.43
CPSF1-202ENST00000527827 IPO11Q9UI26 975 aaKnown RBP23.98■■□□□ 1.43
CPSF1-202ENST00000527827 SALL4Q9UJQ4 1053 aa23.98■■□□□ 1.43
CPSF1-202ENST00000527827 CPED1A4D0V7 1026 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 EME2A4GXA9 379 aaPredicted RBP23.97■■□□□ 1.43
CPSF1-202ENST00000527827 TSPAN6O43657 245 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 JUNDP17535 347 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 ACVRL1P37023 503 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 PFN3P60673 137 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 SGCGQ13326 291 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 DEFB133Q30KQ1 61 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 RAB6CQ53S08 254 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 MIIPQ5JXC2 388 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 ARHGAP40Q5TG30 622 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 TAF3Q5VWG9 929 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 IGF2-ASQ6U949 168 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 EFL1Q7Z2Z2 1120 aaKnown RBP23.97■■□□□ 1.43
CPSF1-202ENST00000527827 PLPP6Q8IY26 295 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 ASB12Q8WXK4 309 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 ISG20Q96AZ6 181 aaKnown RBP23.97■■□□□ 1.43
CPSF1-202ENST00000527827 RAB6CQ9H0N0 254 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 NDFIP2Q9NV92 336 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 SATB2Q9UPW6 733 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 ITM2BQ9Y287 266 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 FHOD1Q9Y613 1164 aa23.97■■□□□ 1.43
CPSF1-202ENST00000527827 C16orf96A6NNT2 1141 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 KLK10O43240 276 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 RHDQ02161 417 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 RAPGEF1Q13905 1077 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 TAF1BQ53T94 588 aaPredicted RBP23.96■■□□□ 1.43
CPSF1-202ENST00000527827 C3orf38Q5JPI3 329 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 MANEALQ5VSG8 457 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 ARCQ7LC44 396 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 OR6K2Q8NGY2 324 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 LMX1AQ8TE12 382 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 RAB7BQ96AH8 199 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 ATXN7L3BQ96GX2 97 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 DPH1Q9BZG8 443 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 NDST4Q9H3R1 872 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 THSD1Q9NS62 852 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 NCKIPSDQ9NZQ3 722 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 PNMA8BQ9ULN7 279 aaPredicted RBP23.96■■□□□ 1.43
CPSF1-202ENST00000527827 SSUH2Q9Y2M2 353 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 ENTPD2Q9Y5L3 495 aa23.96■■□□□ 1.43
CPSF1-202ENST00000527827 TENM4Q6N022 2769 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 CXorf51AA0A1B0GTR3 108 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 TPP1O14773 563 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 ZNF805Q5CZA5 627 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 PERM1Q5SV97 790 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 NOP9Q86U38 636 aaKnown RBP23.95■■□□□ 1.42
CPSF1-202ENST00000527827 RBFAQ8N0V3 343 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 DENND6BQ8NEG7 585 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 ARHGEF2Q92974 986 aaKnown RBP23.95■■□□□ 1.42
CPSF1-202ENST00000527827 WBP1Q96G27 269 aa23.95■■□□□ 1.42
CPSF1-202ENST00000527827 PRR11Q96HE9 360 aaPredicted RBP23.95■■□□□ 1.42
CPSF1-202ENST00000527827 TCEAL2Q9H3H9 227 aaPredicted RBP23.95■■□□□ 1.42
CPSF1-202ENST00000527827 RIOK3O14730 519 aaKnown RBP23.94■■□□□ 1.42
CPSF1-202ENST00000527827 GCATO75600 419 aa23.94■■□□□ 1.42
CPSF1-202ENST00000527827 LSM8O95777 96 aaKnown RBP23.94■■□□□ 1.42
CPSF1-202ENST00000527827 SKOR1P84550 965 aa23.94■■□□□ 1.42
CPSF1-202ENST00000527827 ATP11AP98196 1134 aa23.94■■□□□ 1.42
CPSF1-202ENST00000527827 VWA3BQ502W6 1294 aa23.94■■□□□ 1.42
CPSF1-202ENST00000527827 KLHDC7AQ5VTJ3 777 aa23.94■■□□□ 1.42
CPSF1-202ENST00000527827 CRTC1Q6UUV9 634 aa23.94■■□□□ 1.42
CPSF1-202ENST00000527827 NLRP14Q86W24 1093 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms