RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ATP13A1Q9HD20 1204 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 PLCB1Q9NQ66 1216 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 TMPRSS4Q9NRS4 437 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 ZNF212Q9UDV6 495 aa16.41■□□□□ 0.22
PTPRU-210ENST00000527027 COL6A6A6NMZ7 2263 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 A0A1W2PNU3 283 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-210ENST00000527027 GTPBP10A4D1E9 387 aaKnown RBP16.4■□□□□ 0.22
PTPRU-210ENST00000527027 IGLON5A6NGN9 336 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 FOXN3O00409 490 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-210ENST00000527027 TSPAN6O43657 245 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 SCNN1AP37088 669 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 CCNHP51946 323 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-210ENST00000527027 BECN1Q14457 450 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 DEFB133Q30KQ1 61 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 PLPP6Q8IY26 295 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 LMX1AQ8TE12 382 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 BTN2A2Q8WVV5 523 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 ASB12Q8WXK4 309 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 TTC9Q92623 222 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 CCDC97Q96F63 343 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-210ENST00000527027 HAPLN3Q96S86 360 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 IL12RB2Q99665 862 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 DNAJC12Q9UKB3 198 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 PCDHGA8Q9Y5G5 932 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 ENTPD2Q9Y5L3 495 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 TRPM6Q9BX84 2022 aa16.4■□□□□ 0.22
PTPRU-210ENST00000527027 SPINT1O43278 529 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 C6P13671 934 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 BPIFB4P59827 614 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 PFN3P60673 137 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 ARF5P84085 180 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 SKOR1P84550 965 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 GNA12Q03113 381 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 EIF2B5Q13144 721 aaKnown RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 LY6DQ14210 128 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 NR0B2Q15466 257 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 TPRG1LQ5T0D9 272 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 RBM44Q6ZP01 1051 aaKnown RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 PARS2Q7L3T8 475 aaKnown RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 TMEM35BQ8NCS4 154 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 RAB7BQ96AH8 199 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 ISG20Q96AZ6 181 aaKnown RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 C18orf8Q96DM3 657 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 PRR11Q96HE9 360 aaPredicted RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 SEMA4CQ9C0C4 833 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 ZYG11BQ9C0D3 744 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 HECAQ9UBI9 543 aaPredicted RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 SPASTQ9UBP0 616 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 RWDD2AQ9UIY3 292 aa16.39■□□□□ 0.21
PTPRU-210ENST00000527027 AJAP1Q9UKB5 411 aaPredicted RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 FCF1Q9Y324 198 aaKnown RBP16.39■□□□□ 0.21
PTPRU-210ENST00000527027 MAST4O15021 2626 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 CXorf51AA0A1B0GTR3 108 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 C16orf96A6NNT2 1141 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 B8ZZF3 427 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 K7ENP7 123 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 NEMP1O14524 444 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 TCEA3O75764 348 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 CD160O95971 181 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-210ENST00000527027 GABRB2P47870 512 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 RPIAP49247 311 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 PTK2BQ14289 1009 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 PERM1Q5SV97 790 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 FAM102AQ5T9C2 384 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-210ENST00000527027 INO80CQ6PI98 192 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-210ENST00000527027 FAM71AQ8IYT1 594 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 ARL14Q8N4G2 192 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 DENND6BQ8NEG7 585 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 WDR48Q8TAF3 677 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 GLMNQ92990 594 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 BOCQ9BWV1 1114 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 ZDHHC6Q9H6R6 413 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
PTPRU-210ENST00000527027 CDRT15L2A8MXV6 281 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 MUSKO15146 869 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 GCATO75600 419 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 PNMA6AP0CW24 399 aaPredicted RBP16.37■□□□□ 0.21
PTPRU-210ENST00000527027 ABL2P42684 1182 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 THOP1P52888 689 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 ZNF805Q5CZA5 627 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 FOXR1Q6PIV2 292 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 CRTC1Q6UUV9 634 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 BNIPLQ7Z465 357 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 XYLT1Q86Y38 959 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 DRC7Q8IY82 874 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 RYBPQ8N488 228 aaPredicted RBP16.37■□□□□ 0.21
PTPRU-210ENST00000527027 WDR36Q8NI36 951 aaKnown RBP16.37■□□□□ 0.21
PTPRU-210ENST00000527027 NAT6Q93015 286 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 CENPTQ96BT3 561 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 MED8Q96G25 268 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 TM6SF2Q9BZW4 377 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 PPARGC1AQ9UBK2 798 aaKnown RBP16.37■□□□□ 0.21
PTPRU-210ENST00000527027 APOBEC3BQ9UH17 382 aaKnown RBP16.37■□□□□ 0.21
PTPRU-210ENST00000527027 ACTL7AQ9Y615 435 aa16.37■□□□□ 0.21
PTPRU-210ENST00000527027 MYO18BQ8IUG5 2567 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 LMO7DNF2Z398 122 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms