RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ITGAXP20702 1163 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 KLF10Q13118 480 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 UGP2Q16851 508 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 NOMO2Q5JPE7 1267 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 CFAP157Q5JU67 520 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 LRRC8EQ6NSJ5 796 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 KDELC1Q6UW63 502 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 KDELC2Q7Z4H8 507 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 LSMEM2Q8N112 164 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 SREK1Q8WXA9 508 aaKnown RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 CMTM5Q96DZ9 223 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 SLC39A13Q96H72 371 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 ILKAPQ9H0C8 392 aaPredicted RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 ZCWPW1Q9H0M4 648 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 ABI2Q9NYB9 513 aaPredicted RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 IPO11Q9UI26 975 aaKnown RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 RAP2CQ9Y3L5 183 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 DLX3O60479 287 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 ZMPSTE24O75844 475 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 SKIP12755 728 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 PRDX6P30041 224 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 RAB10P61026 200 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 CAP1Q01518 475 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 ARL13AQ5H913 290 aaPredicted RBP17.79■□□□□ 0.44
USH1C-205ENST00000527020 TSTD2Q5T7W7 516 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 C6orf163Q5TEZ5 329 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 TMCO4Q5TGY1 634 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 METTL21CQ5VZV1 264 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
USH1C-205ENST00000527020 C2CD4AQ8NCU7 369 aaPredicted RBP17.79■□□□□ 0.44
USH1C-205ENST00000527020 ACTRT2Q8TDY3 377 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 NXNL1Q96CM4 212 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 SCYL1Q96KG9 808 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 C1orf74Q96LT6 269 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 SERPINB11Q96P15 392 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 ZIC5Q96T25 663 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 PPM1HQ9ULR3 514 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 SCML2Q9UQR0 700 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 ACOT9Q9Y305 439 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 LOC100653049A0A140TA62 436 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 ARHGEF37A1IGU5 675 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 GRID2O43424 1007 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 KRT34O76011 436 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 PIGNO95427 931 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 COX4I1P13073 169 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 DNAJB1P25685 340 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 POLD2P49005 469 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 PSEN1P49768 467 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 NAGLUP54802 743 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 DSC1Q08554 894 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 IHHQ14623 411 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 DDR2Q16832 855 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 CLLU1OSQ5K130 101 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 KIAA0930Q6ICG6 404 aaPredicted RBP17.79■□□□□ 0.44
USH1C-205ENST00000527020 MSANTD2Q6P1R3 559 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 SPNS2Q8IVW8 549 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 SPATA6LQ8N4H0 392 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 FSD1LQ9BXM9 530 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 OSBPL1AQ9BXW6 950 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 WDR55Q9H6Y2 383 aaPredicted RBP17.79■□□□□ 0.44
USH1C-205ENST00000527020 TCF7L2Q9NQB0 619 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 PRDM5Q9NQX1 630 aaPredicted RBP17.79■□□□□ 0.44
USH1C-205ENST00000527020 XPR1Q9UBH6 696 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 ANGPTL2Q9UKU9 493 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 TLR6Q9Y2C9 796 aa17.79■□□□□ 0.44
USH1C-205ENST00000527020 GOLGA8QA0A0J9YX86 632 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 GOLGA8OA6NCC3 632 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 GOLGA8NF8WBI6 632 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 AURKAO14965 403 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 OAZ2O95190 189 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 RPL14P50914 215 aaKnown RBP17.78■□□□□ 0.44
USH1C-205ENST00000527020 PRKAA2P54646 552 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 FCGRTP55899 365 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 WNT3AP56704 352 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 USP46P62068 366 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 FSCBQ5H9T9 825 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 ZNF470Q6ECI4 717 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 TMC7Q7Z402 723 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 LINC01599Q8WXQ3 324 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 PPP1R2P1Q96PQ5 205 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 ATP13A1Q9HD20 1204 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 ZDHHC2Q9UIJ5 367 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 CDH22Q9UJ99 828 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 THSD7BQ9C0I4 1608 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 CASP8AP2Q9UKL3 1982 aa17.78■□□□□ 0.44
USH1C-205ENST00000527020 GREB1Q4ZG55 1949 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 A6NHS1 94 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 HDAC3O15379 428 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 PDE5AO76074 875 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 PDHA1P08559 390 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 STMN1P16949 149 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 TAS2R39P59534 338 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 PRKCZQ05513 592 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 MSLNQ13421 630 aaPredicted RBP17.77■□□□□ 0.44
USH1C-205ENST00000527020 PCSK7Q16549 785 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 MON1AQ86VX9 555 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 LRRC49Q8IUZ0 686 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 UMODL1-AS1Q8N2C9 162 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 TSNARE1Q96NA8 513 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms