RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 DRAXINQ8NBI3 349 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 SRFBP1Q8NEF9 429 aaKnown RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 ANKRD20A12PQ8NF67 263 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 OR52L2PQ8NGH6 319 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 OR52K2Q8NGK3 314 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 PRSS3P2Q8NHM4 247 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 MAFAQ8NHW3 353 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 NEK9Q8TD19 979 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 SNX21Q969T3 373 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 GCC1Q96CN9 775 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 KIF1BPQ96EK5 621 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 BICD1Q96G01 975 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 WDYHV1Q96HA8 205 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 RITA1Q96K30 269 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 CCDC43Q96MW1 224 aaKnown RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 LENG8Q96PV6 779 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 MPHOSPH8Q99549 860 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 GDF15Q99988 308 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 CRACR2AQ9BSW2 395 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 THAP7Q9BT49 309 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 CENPOQ9BU64 300 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 MMTAG2Q9BU76 263 aaKnown RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 ISCA1Q9BUE6 129 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 TMEM120AQ9BXJ8 343 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 BRD8Q9H0E9 1235 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 STMN4Q9H169 189 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 CLSTN2Q9H4D0 955 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 NCOR1P1Q9H4R4 102 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 GRPEL1Q9HAV7 217 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 SMYD2Q9NRG4 433 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 ATP8A2Q9NTI2 1148 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 BLOC1S4Q9NUP1 217 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 LIN7CQ9NUP9 197 aaKnown RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 ABCF3Q9NUQ8 709 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 ARL8BQ9NVJ2 186 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 TRNAU1APQ9NX07 287 aaKnown RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 ZNF624Q9P2J8 865 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 KLHL13Q9P2N7 655 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 SH3BGRL2Q9UJC5 107 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 SUFUQ9UMX1 484 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 CAB39Q9Y376 341 aaPredicted RBP3.35□□□□□ -1.87
COPB1-205ENST00000526527 C2CD2Q9Y426 696 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 SNX8Q9Y5X2 465 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 SPATA31A1Q5TZJ5 1347 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 WDR17Q8IZU2 1322 aa3.35□□□□□ -1.87
COPB1-205ENST00000526527 ARHGAP5Q13017 1502 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 EHBP1L1Q8N3D4 1523 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 FRMPD1Q5SYB0 1578 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 AKR1B15C9JRZ8 316 aaPredicted RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 E5RJQ4 531 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 BOLA2-SMG1P6H3BVE0 249 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 SOCS2O14508 198 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 PCDH17O14917 1159 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 ZBTB43O43298 467 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 ZBED4O75132 1171 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 FGFR1OPO95684 399 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 GUCA1CO95843 209 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 TPM1P09493 284 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 GLULP15104 373 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 FPR3P25089 353 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 MSNP26038 577 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 TACR3P29371 465 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 ELF1P32519 619 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 PBX1P40424 430 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 ASMTP46597 345 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 PCP4P48539 62 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 RBM5P52756 815 aaKnown RBP eCLIP3.34□□□□□ -1.87
COPB1-205ENST00000526527 TUBA1BP68363 451 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 RNASELQ05823 741 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 DEUP1Q05D60 604 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 G3BP1Q13283 466 aaKnown RBP eCLIP3.34□□□□□ -1.87
COPB1-205ENST00000526527 DNASE1L3Q13609 305 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 MFSD13AQ14CX5 517 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 LARS2Q15031 903 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 POSTNQ15063 836 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 RASA2Q15283 850 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 RBBP5Q15291 538 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 PKN2Q16513 984 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 TAF12Q16514 161 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 AASDHQ4L235 1098 aaPredicted RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 SLC10A5Q5PT55 438 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 INTS11Q5TA45 600 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 TANGO2Q6ICL3 276 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 GALNT17Q6IS24 598 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 KIAA1161Q6NSJ0 714 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 C11orf88Q6PI97 169 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 LVRNQ6Q4G3 990 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 C1orf122Q6ZSJ8 110 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 NEK10Q6ZWH5 1172 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 TUBA1AQ71U36 451 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 BRINP3Q76B58 766 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 MEPCEQ7L2J0 689 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 RTL10Q7L3V2 364 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 CCDC186Q7Z3E2 898 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 IRF2BP2Q7Z5L9 587 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 VSIG1Q86XK7 387 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 FAM114A1Q8IWE2 563 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 UNC45BQ8IWX7 931 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms