RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 ATXN1LP0C7T5 689 aaKnown RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 TMEM253P0C7T8 217 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 CD38P28907 300 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 CHRNA3P32297 505 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 MAN1A1P33908 653 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 NDST2P52849 883 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 TAS2R38P59533 333 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 TPI1P60174 286 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 ARF5P84085 180 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 HNRNPDQ14103 355 aaKnown RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 TCEAL1Q15170 157 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 ZNF423Q2M1K9 1284 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 FAM46CQ5VWP2 391 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 C22orf39Q6P5X5 142 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 LEKR1Q6ZMV7 388 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 DBX2Q6ZNG2 339 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 RAB44Q7Z6P3 723 aaPredicted RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 DNAAF5Q86Y56 855 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 GATAD2AQ86YP4 633 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 PYROXD2Q8N2H3 581 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 PCDH20Q8N6Y1 951 aaKnown RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 TC2NQ8N9U0 490 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 GRIN3AQ8TCU5 1115 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 MYOCQ99972 504 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 SNRNP25Q9BV90 132 aaKnown RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 TRIM7Q9C029 511 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 KDM4CQ9H3R0 1056 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 ZWILCHQ9H900 591 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 RCOR3Q9P2K3 495 aaPredicted RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 HPCAL4Q9UM19 191 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
RBBP4-216ENST00000525506 PCDHGB2Q9Y5G2 931 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 MYLKQ15746 1914 aa10.66□□□□□ -0.7
RBBP4-216ENST00000525506 FLRT2O43155 660 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 LATO43561 262 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 KDELR3O43731 214 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 CREB3O43889 395 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 LCA5LO95447 670 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 CD160O95971 181 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 FECHP22830 423 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 CCT8P50990 548 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 DNA2P51530 1060 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 ZNF75DP51815 510 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 ADKP55263 362 aaKnown RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 SLC25A11Q02978 314 aaKnown RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 CCDC15Q0P6D6 951 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 POLD3Q15054 466 aaPredicted RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 SHBQ15464 509 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 INO80DQ53TQ3 878 aaPredicted RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 CCDC157Q569K6 752 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 PIP5KL1Q5T9C9 394 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 DPY19L3Q6ZPD9 716 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 RFX8Q6ZV50 586 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 PRPF39Q86UA1 669 aaKnown RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 MARCH9Q86YJ5 346 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 RHOT2Q8IXI1 618 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 CCDC170Q8IYT3 715 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 LZTR1Q8N653 840 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 NETO2Q8NC67 525 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 TMIEQ8NEW7 156 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 BAHD1Q8TBE0 780 aaPredicted RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 ARHGEF26Q96DR7 871 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 LRIG1Q96JA1 1093 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 PANX2Q96RD6 677 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 DHX35Q9H5Z1 703 aaKnown RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 LRRC19Q9H756 370 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 CAAP1Q9H8G2 361 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 TOR4AQ9NXH8 423 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 DNAI1Q9UI46 699 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 ZMIZ1Q9ULJ6 1067 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 FCF1Q9Y324 198 aaKnown RBP10.65□□□□□ -0.7
RBBP4-216ENST00000525506 MSRB2Q9Y3D2 182 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 NEUROG3Q9Y4Z2 214 aa10.65□□□□□ -0.7
RBBP4-216ENST00000525506 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.71
RBBP4-216ENST00000525506 ANKRD36A6QL64 1941 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 KNTC1P50748 2209 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 A0A1B0GTQ1 180 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 H3BRJ5 948 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 TLR4O00206 839 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 EEF2KO00418 725 aaKnown RBP10.64□□□□□ -0.71
RBBP4-216ENST00000525506 SLC31A1O15431 190 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 RNGTTO60942 597 aaKnown RBP10.64□□□□□ -0.71
RBBP4-216ENST00000525506 LEFTY1O75610 366 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 PROSCO94903 275 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 PRNPP04156 253 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 PRLRP16471 622 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 GKP32189 559 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 NUDT1P36639 197 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 ARL4AP40617 200 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 ARHGAP25P42331 645 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 RECQLP46063 649 aaPredicted RBP10.64□□□□□ -0.71
RBBP4-216ENST00000525506 BNIP3Q12983 259 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 SERINC3Q13530 473 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 DPYSQ14117 519 aa10.64□□□□□ -0.71
RBBP4-216ENST00000525506 SUZ12Q15022 739 aaKnown RBP10.64□□□□□ -0.71
RBBP4-216ENST00000525506 HADHQ16836 314 aaKnown RBP10.64□□□□□ -0.71
RBBP4-216ENST00000525506 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms