RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ACBD5Q5T8D3 534 aaPredicted RBP24.39■■□□□ 1.49
USP47-205ENST00000525257 TRNP1Q6NT89 227 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 GUSBP11Q6P575 273 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 VCPIP1Q96JH7 1222 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 HAPLN3Q96S86 360 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 ASCL3Q9NQ33 180 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 IGLON5A6NGN9 336 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 FPGTO14772 594 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 KLK10O43240 276 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 AQP9O43315 295 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 AP1G1O43747 822 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 GKP32189 559 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 CDH5P33151 784 aaPredicted RBP24.38■■□□□ 1.49
USP47-205ENST00000525257 SCNN1AP37088 669 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 ABL2P42684 1182 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 SGCGQ13326 291 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 RAPGEF1Q13905 1077 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 TAF3Q5VWG9 929 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 SMYD5Q6GMV2 418 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 EFL1Q7Z2Z2 1120 aaKnown RBP24.38■■□□□ 1.49
USP47-205ENST00000525257 RYBPQ8N488 228 aaPredicted RBP24.38■■□□□ 1.49
USP47-205ENST00000525257 OR6K2Q8NGY2 324 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 LMX1AQ8TE12 382 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 CFAP57Q96MR6 1250 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 KLF6Q99612 283 aaPredicted RBP24.38■■□□□ 1.49
USP47-205ENST00000525257 THSD1Q9NS62 852 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 KIAA1468Q9P260 1216 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 HECAQ9UBI9 543 aaPredicted RBP24.38■■□□□ 1.49
USP47-205ENST00000525257 GGT7Q9UJ14 662 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 SATB2Q9UPW6 733 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 ITM2BQ9Y287 266 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 CSNK1G3Q9Y6M4 447 aa24.38■■□□□ 1.49
USP47-205ENST00000525257 SPINT1O43278 529 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 CYP11B1P15538 503 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 JUNDP17535 347 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 ACVRL1P37023 503 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 CAMK4Q16566 473 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 CRTC1Q6UUV9 634 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 ATXN7L3BQ96GX2 97 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 C1QTNF2Q9BXJ5 285 aa24.37■■□□□ 1.49
USP47-205ENST00000525257 A0A1W2PNU3 283 aaPredicted RBP24.36■■□□□ 1.49
USP47-205ENST00000525257 C16orf96A6NNT2 1141 aa24.36■■□□□ 1.49
USP47-205ENST00000525257 NEMP1O14524 444 aa24.36■■□□□ 1.49
USP47-205ENST00000525257 CD160O95971 181 aa24.36■■□□□ 1.49
USP47-205ENST00000525257 RHDQ02161 417 aa24.36■■□□□ 1.49
USP47-205ENST00000525257 DRAP1Q14919 205 aaPredicted RBP24.36■■□□□ 1.49
USP47-205ENST00000525257 MAN2A1Q16706 1144 aa24.36■■□□□ 1.49
USP47-205ENST00000525257 TPD52L1Q16890 204 aaPredicted RBP24.36■■□□□ 1.49
USP47-205ENST00000525257 LENG8Q96PV6 779 aaPredicted RBP24.36■■□□□ 1.49
USP47-205ENST00000525257 TMEM51Q9NW97 253 aa24.36■■□□□ 1.49
USP47-205ENST00000525257 NCKIPSDQ9NZQ3 722 aa24.36■■□□□ 1.49
USP47-205ENST00000525257 TSPAN6O43657 245 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 LZTS3O60299 673 aaPredicted RBP24.35■■□□□ 1.49
USP47-205ENST00000525257 EIF2B5Q13144 721 aaKnown RBP24.35■■□□□ 1.49
USP47-205ENST00000525257 DPY19L2P1Q6NXN4 242 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 BNIPLQ7Z465 357 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 ZSCAN30Q86W11 494 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 RBFAQ8N0V3 343 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 IL12RB2Q99665 862 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.35■■□□□ 1.49
USP47-205ENST00000525257 TCEAL2Q9H3H9 227 aaPredicted RBP24.35■■□□□ 1.49
USP47-205ENST00000525257 NDFIP2Q9NV92 336 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 PPARGC1AQ9UBK2 798 aaKnown RBP24.35■■□□□ 1.49
USP47-205ENST00000525257 SALL4Q9UJQ4 1053 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 TMEM59LQ9UK28 342 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 FHOD1Q9Y613 1164 aa24.35■■□□□ 1.49
USP47-205ENST00000525257 MUSKO15146 869 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 RBMS1P29558 406 aaKnown RBP24.34■■□□□ 1.49
USP47-205ENST00000525257 PFN3P60673 137 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 ATP11AP98196 1134 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 NR0B2Q15466 257 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 RAB6CQ53S08 254 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 PERM1Q5SV97 790 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 EMC1Q8N766 993 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 DENND6BQ8NEG7 585 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 RAB7BQ96AH8 199 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 ISG20Q96AZ6 181 aaKnown RBP24.34■■□□□ 1.49
USP47-205ENST00000525257 DPH1Q9BZG8 443 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 RAB6CQ9H0N0 254 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 NDST4Q9H3R1 872 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 APOBEC3BQ9UH17 382 aaKnown RBP24.34■■□□□ 1.49
USP47-205ENST00000525257 ENTPD2Q9Y5L3 495 aa24.34■■□□□ 1.49
USP47-205ENST00000525257 RP1P56715 2156 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 EME2A4GXA9 379 aaPredicted RBP24.33■■□□□ 1.49
USP47-205ENST00000525257 KRIT1O00522 736 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 UGT2B4P06133 528 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 PRKCSHP14314 528 aaPredicted RBP24.33■■□□□ 1.49
USP47-205ENST00000525257 ZNF805Q5CZA5 627 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 RWDD4Q6NW29 188 aaKnown RBP24.33■■□□□ 1.49
USP47-205ENST00000525257 FOXR1Q6PIV2 292 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 IGF2-ASQ6U949 168 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 LEKR1Q6ZMV7 388 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 RBM44Q6ZP01 1051 aaKnown RBP24.33■■□□□ 1.49
USP47-205ENST00000525257 NOP9Q86U38 636 aaKnown RBP24.33■■□□□ 1.49
USP47-205ENST00000525257 MSANTD4Q8NCY6 345 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 BTN2A2Q8WVV5 523 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 CPA5Q8WXQ8 436 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 METTL5Q9NRN9 209 aaKnown RBP24.33■■□□□ 1.49
USP47-205ENST00000525257 SPASTQ9UBP0 616 aa24.33■■□□□ 1.49
USP47-205ENST00000525257 DNAI1Q9UI46 699 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms