RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SERGEFQ9UGK8 458 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 SEPT3Q9UH03 358 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 SALL4Q9UJQ4 1053 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 TFR2Q9UP52 801 aa12.75□□□□□ -0.37
VEGFA-225ENST00000523950 C3orf70A6NLC5 250 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 APOL1O14791 398 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 MFSD11O43934 449 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 MAFKO60675 156 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 ITPKAP23677 461 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 CCR5P51681 352 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 NEK3P51956 506 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 LBRQ14739 615 aaKnown RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 TAZQ16635 292 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 DUOXA1Q1HG43 343 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 ZNF805Q5CZA5 627 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 RALGPS1Q5JS13 557 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 PIP5KL1Q5T9C9 394 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 AGBL4Q5VU57 503 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 DCAF12L1Q5VU92 463 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 LEKR1Q6ZMV7 388 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 PRR23CQ6ZRP0 262 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 ERN2Q76MJ5 926 aaKnown RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 RGL4Q8IZJ4 473 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 RNF10Q8N5U6 811 aaKnown RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 C12orf50Q8NA57 414 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 OR14C36Q8NHC7 312 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 EXD1Q8NHP7 514 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 KIAA1524Q8TCG1 905 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 GRIN3AQ8TCU5 1115 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 HCAR2Q8TDS4 363 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 RAB7BQ96AH8 199 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 HDAC11Q96DB2 347 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 RBM41Q96IZ5 413 aaKnown RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 TSGA13Q96PP4 275 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 PSKH2Q96QS6 385 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 TUBGCP5Q96RT8 1024 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 DESI2Q9BSY9 194 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 ZDHHC6Q9H6R6 413 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 PARD6AQ9NPB6 346 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-225ENST00000523950 HYOU1Q9Y4L1 999 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 DMDP11532 3685 aa12.74□□□□□ -0.37
VEGFA-225ENST00000523950 A0A1B0GTW7 788 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 CCDC66A2RUB6 948 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 KRIT1O00522 736 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 KHNYNO15037 678 aaKnown RBP12.73□□□□□ -0.37
VEGFA-225ENST00000523950 KRT86O43790 486 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ZRANB2O95218 330 aaKnown RBP eCLIP12.73□□□□□ -0.374e-17■■□□□ 11.4
VEGFA-225ENST00000523950 SDHBP21912 280 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 CCNCP24863 283 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 CTNNA2P26232 953 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 CTNNA1P35221 906 aaKnown RBP12.73□□□□□ -0.37
VEGFA-225ENST00000523950 SUOXP51687 545 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 COPS2P61201 443 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ARHGAP8P85298 464 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 CNTN1Q12860 1018 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 TFDP2Q14188 446 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ZNF235Q14590 738 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 SLC23A3Q6PIS1 610 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 NCEH1Q6PIU2 408 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 GDPD4Q6W3E5 623 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ARHGAP36Q6ZRI8 547 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ZNF662Q6ZS27 426 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 BZW1Q7L1Q6 419 aaKnown RBP12.73□□□□□ -0.37
VEGFA-225ENST00000523950 TRIM69Q86WT6 500 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 RCOR2Q8IZ40 523 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 DEFB119Q8N690 84 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 BIRC7Q96CA5 298 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ZNF641Q96N77 438 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-225ENST00000523950 C6orf106Q9H6K1 298 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-225ENST00000523950 DKK3Q9UBP4 350 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 AMACRQ9UHK6 382 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 PCDHA3Q9Y5H8 950 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ADGRG1Q9Y653 693 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 DUSP10Q9Y6W6 482 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 NUMA1Q14980 2115 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 VPS13AQ96RL7 3174 aa12.73□□□□□ -0.37
VEGFA-225ENST00000523950 ANKRD36A6QL64 1941 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 USP34Q70CQ2 3546 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 A0A1W2PQ67 120 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 GRID2IPA4D2P6 1211 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 AP1G1O43747 822 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 PEX11BO96011 259 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 IGHV4-34P06331 123 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 CCDC175P0C221 793 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 TNNT1P13805 278 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 ADRB3P13945 408 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 CD27P26842 260 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 CETN2P41208 172 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 CDKN2BP42772 138 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 NR2C2P49116 596 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 METAP1P53582 386 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 AP1S1P61966 158 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 GBE1Q04446 702 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms