RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ENTPD2Q9Y5L3 495 aa26.41■■□□□ 1.82
PVT1-219ENST00000523427 NR0B2Q15466 257 aa26.4■■□□□ 1.82
PVT1-219ENST00000523427 RBM44Q6ZP01 1051 aaKnown RBP26.4■■□□□ 1.82
PVT1-219ENST00000523427 ELOA2Q8IYF1 753 aaPredicted RBP26.4■■□□□ 1.82
PVT1-219ENST00000523427 PCDH20Q8N6Y1 951 aaKnown RBP26.4■■□□□ 1.82
PVT1-219ENST00000523427 SLC46A1Q96NT5 459 aa26.4■■□□□ 1.82
PVT1-219ENST00000523427 TCEAL2Q9H3H9 227 aaPredicted RBP26.4■■□□□ 1.82
PVT1-219ENST00000523427 GPR27Q9NS67 375 aa26.4■■□□□ 1.82
PVT1-219ENST00000523427 GGT7Q9UJ14 662 aa26.4■■□□□ 1.82
PVT1-219ENST00000523427 DNAJC12Q9UKB3 198 aa26.4■■□□□ 1.82
PVT1-219ENST00000523427 PAXBP1Q9Y5B6 917 aa26.4■■□□□ 1.82
PVT1-219ENST00000523427 COL6A6A6NMZ7 2263 aa26.4■■□□□ 1.82
PVT1-219ENST00000523427 ILVBLA1L0T0 632 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 FOXN3O00409 490 aaPredicted RBP26.39■■□□□ 1.82
PVT1-219ENST00000523427 ZMPSTE24O75844 475 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 F9P00740 461 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 PON1P27169 355 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 CLCN1P35523 988 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 ARF5P84085 180 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 EIF2B5Q13144 721 aaKnown RBP26.39■■□□□ 1.82
PVT1-219ENST00000523427 C2CD6Q53TS8 623 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 PERM1Q5SV97 790 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 FAM102AQ5T9C2 384 aaPredicted RBP26.39■■□□□ 1.82
PVT1-219ENST00000523427 WBP1Q96G27 269 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 KLF6Q99612 283 aaPredicted RBP26.39■■□□□ 1.82
PVT1-219ENST00000523427 CSNK1G3Q9Y6M4 447 aa26.39■■□□□ 1.82
PVT1-219ENST00000523427 GOLGA8SH3BPF8 625 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 ABL2P42684 1182 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 ADKP55263 362 aaKnown RBP26.38■■□□□ 1.81
PVT1-219ENST00000523427 PRRT3Q5FWE3 981 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 TTC9Q92623 222 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 C1orf74Q96LT6 269 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 CEP44Q9C0F1 390 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 NCKIPSDQ9NZQ3 722 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 SALL4Q9UJQ4 1053 aa26.38■■□□□ 1.81
PVT1-219ENST00000523427 PIEZO2Q9H5I5 2752 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 IGLV3-10A0A075B6K4 115 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 EME2A4GXA9 379 aaPredicted RBP26.37■■□□□ 1.81
PVT1-219ENST00000523427 ACVRL1P37023 503 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 THOP1P52888 689 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 GNA12Q03113 381 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 SLC20A2Q08357 652 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 TCEA2Q15560 299 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 ZSCAN23Q3MJ62 389 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 SLC25A52Q3SY17 297 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 LEKR1Q6ZMV7 388 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 FAM131BQ86XD5 332 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 ZDHHC17Q8IUH5 632 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 TMEM35BQ8NCS4 154 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 C18orf8Q96DM3 657 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 C1QTNF2Q9BXJ5 285 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 ZYG11BQ9C0D3 744 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 SPASTQ9UBP0 616 aa26.37■■□□□ 1.81
PVT1-219ENST00000523427 APOBEC3BQ9UH17 382 aaKnown RBP26.37■■□□□ 1.81
PVT1-219ENST00000523427 C16orf96A6NNT2 1141 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 KRIT1O00522 736 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 GCATO75600 419 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 TNFSF15O95150 251 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 C6P13671 934 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 MTIF2P46199 727 aaKnown RBP26.36■■□□□ 1.81
PVT1-219ENST00000523427 LRRC73Q5JTD7 316 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 TAF3Q5VWG9 929 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 VPS36Q86VN1 386 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 NT5C3BQ969T7 300 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 PGAP3Q96FM1 320 aaPredicted RBP26.36■■□□□ 1.81
PVT1-219ENST00000523427 SIX2Q9NPC8 291 aa26.36■■□□□ 1.81
PVT1-219ENST00000523427 B8ZZF3 427 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 TSPAN6O43657 245 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 AP1G1O43747 822 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 FLT3P36888 993 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 RP1P56715 2156 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 ZNF783Q6ZMS7 281 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 CCDC81Q6ZN84 652 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 SLC35F3Q8IY50 421 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 ARL14Q8N4G2 192 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 TPCN2Q8NHX9 752 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 BTN2A2Q8WVV5 523 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 PRR11Q96HE9 360 aaPredicted RBP26.35■■□□□ 1.81
PVT1-219ENST00000523427 CFAP57Q96MR6 1250 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 LENG8Q96PV6 779 aaPredicted RBP26.35■■□□□ 1.81
PVT1-219ENST00000523427 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.35■■□□□ 1.81
PVT1-219ENST00000523427 KIF26BQ2KJY2 2108 aa26.35■■□□□ 1.81
PVT1-219ENST00000523427 GADD45BO75293 160 aaPredicted RBP26.34■■□□□ 1.81
PVT1-219ENST00000523427 UGT2B4P06133 528 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 ANXA6P08133 673 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 RPIAP49247 311 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 PFN3P60673 137 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 ARTNQ5T4W7 220 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 FAXCQ5TGI0 409 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 RWDD4Q6NW29 188 aaKnown RBP26.34■■□□□ 1.81
PVT1-219ENST00000523427 XYLT1Q86Y38 959 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 PHACTR4Q8IZ21 702 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 GLMNQ92990 594 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 CCDC97Q96F63 343 aaPredicted RBP26.34■■□□□ 1.81
PVT1-219ENST00000523427 CCDC3Q9BQI4 270 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 GULP1Q9UBP9 304 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 ZNF212Q9UDV6 495 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 PCDHGA8Q9Y5G5 932 aa26.34■■□□□ 1.81
PVT1-219ENST00000523427 K7ENP7 123 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 TPP1O14773 563 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms