RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ZNF423Q2M1K9 1284 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 ASTE1Q2TB18 679 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 BOLA3Q53S33 107 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 ATXN7L2Q5T6C5 722 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 NAPEPLDQ6IQ20 393 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 DBX2Q6ZNG2 339 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 NAXDQ8IW45 347 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 NIPA2Q8N8Q9 360 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 SKA1Q96BD8 255 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 LRIG1Q96JA1 1093 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 IP6K2Q9UHH9 426 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 ANAPC7Q9UJX3 599 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 DMTF1Q9Y222 760 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 CABIN1Q9Y6J0 2220 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 J3KR12 359 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 KRIT1O00522 736 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 ADRB3P13945 408 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 PAPOLAP51003 745 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 ZNF135P52742 658 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 SLC18A3Q16572 532 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 SMTNL2Q2TAL5 461 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 SETMARQ53H47 684 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 PRAMEF14Q5SWL7 426 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 AFMIDQ63HM1 303 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 TXNRD3NBQ6F5E7 133 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 FBXL19Q6PCT2 694 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 PARS2Q7L3T8 475 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 KLK6Q92876 244 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 ZWILCHQ9H900 591 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 PDFQ9HBH1 243 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 ZFR2Q9UPR6 939 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 PCDHGB2Q9Y5G2 931 aa18.16■□□□□ 0.5
TRAPPC9-211ENST00000521700 TP53BP1Q12888 1972 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 C16orf96A6NNT2 1141 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 MYO1FO00160 1098 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 TLR4O00206 839 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 SLC31A1O15431 190 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 PRAMEF11O60813 436 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 PCDH8O95206 1070 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 RARAP10276 462 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 RHOAP61586 193 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 HNRNPDQ14103 355 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 DPYSQ14117 519 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 DPYSL2Q16555 572 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 ZNF284Q2VY69 593 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 ZNF805Q5CZA5 627 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 HORMAD1Q86X24 394 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 ARHGAP12Q8IWW6 846 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 NPWQ8N729 165 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 MFSD2AQ8NA29 543 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 SETD7Q8WTS6 366 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 HSPH1Q92598 858 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 GDAP1L1Q96MZ0 367 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 CHP1Q99653 195 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 PACSIN1Q9BY11 444 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 LHX3Q9UBR4 397 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 UBA2Q9UBT2 640 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 PCOLCE2Q9UKZ9 415 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 FADS3Q9Y5Q0 445 aa18.15■□□□□ 0.5
TRAPPC9-211ENST00000521700 SSU72P8A0A1W2PR75 194 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 ARHGAP42A6NI28 874 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 PRAMEF26H0Y7S4 382 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 DFNA5O60443 496 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 CBFA2T3O75081 653 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 IGSF6O95976 241 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 UGT2B4P06133 528 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 PRLRP16471 622 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 ADKP55263 362 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 SLC25A11Q02978 314 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 STAT4Q14765 748 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 SUZ12Q15022 739 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 TRIP6Q15654 476 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 SLC45A4Q5BKX6 768 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 SEL1L3Q68CR1 1132 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 GDPD4Q6W3E5 623 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 POLNQ7Z5Q5 900 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 KLHL32Q96NJ5 620 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 ELF4Q99607 663 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 OSBPL1AQ9BXW6 950 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 ABHD10Q9NUJ1 306 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 ZNHIT6Q9NWK9 470 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 CA5BQ9Y2D0 317 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 MFHAS1Q9Y4C4 1052 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 PCDHB9Q9Y5E1 797 aa18.14■□□□□ 0.49
TRAPPC9-211ENST00000521700 A0A1B0GTQ1 180 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 H3BRJ5 948 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 INSIG1O15503 277 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 AP1G1O43747 822 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 MFAP3LO75121 409 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 TPM1P09493 284 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 H2AFZP0C0S5 128 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 AMPD1P23109 780 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 ARL4AP40617 200 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 ABL2P42684 1182 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 CCT8P50990 548 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 NXPH1P58417 271 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 IL9RQ01113 521 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms