RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 A0A087WZ62 844 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 IGKV6D-41A0A0C4DH26 115 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 A0A1B0GUL6 1792 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 SSC5DA1L4H1 1573 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 OR2W5A6NFC9 320 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CD8B2A6NJW9 211 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 MPHOSPH10O00566 681 aaKnown RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CXCL11O14625 94 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 RRHO14718 337 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 RANBP6O60518 1105 aaKnown RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CBFA2T3O75081 653 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 SGPL1O95470 568 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 GH2P01242 217 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ENO1P06733 434 aaKnown RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ASNSP08243 561 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CYP21A2P08686 494 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 PSG1P11464 419 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 AKR1B1P15121 316 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TSHRP16473 764 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 MCCP23508 829 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 MST1P26927 711 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 HSPA4P34932 840 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 NOVP48745 357 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ALDH7A1P49419 539 aaKnown RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TFAP4Q01664 338 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 PPATQ06203 517 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 NSUN2Q08J23 767 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TRDNQ13061 729 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 SPP2Q13103 211 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 PPIL2Q13356 520 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CHD4Q14839 1912 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 P3H1Q32P28 736 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ARL13BQ3SXY8 428 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TMEM196Q5HYL7 178 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 KLHDC7AQ5VTJ3 777 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 FAM90A2PQ658T7 463 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CCDC144NLQ6NUI1 221 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ACSM6Q6P461 480 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 COLCA1Q6ZS62 124 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 KIAA0408Q6ZU52 694 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 STOX1Q6ZVD7 989 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TMEM179Q6ZVK1 233 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TIAM2Q8IVF5 1701 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ADGRF4Q8IZF3 695 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TXLNBQ8N3L3 684 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 SAMD3Q8N6K7 520 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 RNF152Q8N8N0 203 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 GLMPQ8WWB7 406 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 BRI3BPQ8WY22 251 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ESR2Q92731 530 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ZKSCAN4Q969J2 545 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ZNF845Q96IR2 970 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ROBO3Q96MS0 1386 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 MPHOSPH6Q99547 160 aaKnown RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 SCNM1Q9BWG6 230 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TTLL2Q9BWV7 592 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 KRT23Q9C075 422 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 PCDHAC1Q9H158 963 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 AS3MTQ9HBK9 375 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 AGO4Q9HCK5 861 aaKnown RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 PAPOLBQ9NRJ5 636 aaKnown RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 DECR2Q9NUI1 292 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 TCP11L1Q9NUJ3 509 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CA14Q9ULX7 337 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 CEP83Q9Y592 693 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-209ENST00000521559 ZHX2Q9Y6X8 837 aa3.57□□□□□ -1.84
VPS13B-209ENST00000521559 DICER1Q9UPY3 1922 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 SCN4AP35499 1836 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 EMSYQ7Z589 1322 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 IGLV5-39A0A0G2JS06 123 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TSPY2A6NKD2 308 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 B4DGG1 531 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 C19orf81C9J6K1 198 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 E7EWF7 191 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 HNRNPDLO14979 420 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TPD52L2O43399 206 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 ZC3H11AO75152 810 aaKnown RBP eCLIP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 PRDM1O75626 825 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 SYF2O95926 243 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 CRYABP02511 175 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 MYL3P08590 195 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TSPY3P0CV98 308 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TSPY8P0CW00 308 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 SRGAP2BP0DMP2 458 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 CETPP11597 493 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 EEF2P13639 858 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 AKR1A1P14550 325 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 EGR1P18146 543 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 PSMA5P28066 241 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 NDUFS1P28331 727 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 HOXA7P31268 230 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 SLC8A1P32418 973 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 MAP2K2P36507 400 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TM4SF4P48230 202 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 PRIM2P49643 509 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 BACE1P56817 501 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 ICA1Q05084 483 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 BTKQ06187 659 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 CSHL1Q14406 222 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms