RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MINDY1Q8N5J2 469 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 LZTR1Q8N653 840 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 FAM71BQ8TC56 605 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 TSC1Q92574 1164 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 GDAP1L1Q96MZ0 367 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 INTUQ9ULD6 942 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 PCDH15Q96QU1 1955 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 A0A1B0GVT2 93 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 KRIT1O00522 736 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 LATO43561 262 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 MTA2O94776 668 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 POP4O95707 220 aaKnown RBP20.97■□□□□ 0.95
TRIM35-203ENST00000521253 IL4RP24394 825 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 ARSEP51690 589 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 BNC1Q01954 994 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 CCDC15Q0P6D6 951 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 MMRN1Q13201 1228 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 MESDQ14696 234 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 UAP1L1Q3KQV9 507 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 TMCO3Q6UWJ1 677 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 LAYNQ6UX15 382 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 RHOT2Q8IXI1 618 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 RFFLQ8WZ73 363 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 LRIG1Q96JA1 1093 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 SLC6A18Q96N87 628 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 PANX2Q96RD6 677 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 PREBQ9HCU5 417 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 RCOR3Q9P2K3 495 aaPredicted RBP20.97■□□□□ 0.95
TRIM35-203ENST00000521253 LHX3Q9UBR4 397 aa20.97■□□□□ 0.95
TRIM35-203ENST00000521253 TPX2Q9ULW0 747 aaKnown RBP20.97■□□□□ 0.95
TRIM35-203ENST00000521253 SPTBN2O15020 2390 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 IGSF6O95976 241 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 UGT2B4P06133 528 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 PARS2Q7L3T8 475 aaKnown RBP20.96■□□□□ 0.95
TRIM35-203ENST00000521253 ERMP1Q7Z2K6 904 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 TRIM69Q86WT6 500 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 EXOC2Q96KP1 924 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 ZDHHC5Q9C0B5 715 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 SP110Q9HB58 689 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 KLHL11Q9NVR0 708 aa20.96■□□□□ 0.95
TRIM35-203ENST00000521253 CNOT1A5YKK6 2376 aaKnown RBP20.95■□□□□ 0.94
TRIM35-203ENST00000521253 LCA5LO95447 670 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 KRT7P08729 469 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 ADRB3P13945 408 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 MAT2AP31153 395 aaKnown RBP20.95■□□□□ 0.94
TRIM35-203ENST00000521253 ARHGAP25P42331 645 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 MAGEA1P43355 309 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 GRIA4P48058 902 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 NEK3P51956 506 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 RACK1P63244 317 aaKnown RBP20.95■□□□□ 0.94
TRIM35-203ENST00000521253 DPYSL3Q14195 570 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 TEAD4Q15561 434 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 CCDC170Q8IYT3 715 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 KCTD6Q8NC69 237 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 OSBPL1AQ9BXW6 950 aa20.95■□□□□ 0.94
TRIM35-203ENST00000521253 IPO11Q9UI26 975 aaKnown RBP20.95■□□□□ 0.94
TRIM35-203ENST00000521253 WNT9AO14904 365 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 INSIG1O15503 277 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 OPHN1O60890 802 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 RNGTTO60942 597 aaKnown RBP20.94■□□□□ 0.94
TRIM35-203ENST00000521253 PALMO75781 387 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 IL10RBQ08334 325 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 TCEAL1Q15170 157 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 KIF19Q2TAC6 998 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 ZNF805Q5CZA5 627 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 FBXL19Q6PCT2 694 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 GDPD4Q6W3E5 623 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 PRPF39Q86UA1 669 aaKnown RBP20.94■□□□□ 0.94
TRIM35-203ENST00000521253 SERAC1Q96JX3 654 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 KLHL32Q96NJ5 620 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 CALN1Q9BXU9 219 aa20.94■□□□□ 0.94
TRIM35-203ENST00000521253 DNAAF2Q9NVR5 837 aaKnown RBP20.94■□□□□ 0.94
TRIM35-203ENST00000521253 A0A1W2PQU0 124 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 C16orf96A6NNT2 1141 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 GJB3O75712 270 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 FECHP22830 423 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 SERPINB6P35237 376 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 RAD51Q06609 339 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 PDK2Q15119 407 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 NEK5Q6P3R8 708 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 IL27RAQ6UWB1 636 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 ADAT2Q7Z6V5 191 aaKnown RBP20.93■□□□□ 0.94
TRIM35-203ENST00000521253 HORMAD1Q86X24 394 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 TSEN2Q8NCE0 465 aaKnown RBP20.93■□□□□ 0.94
TRIM35-203ENST00000521253 PCDH19Q8TAB3 1148 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 ZNF670Q9BS34 389 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 AASDHPPTQ9NRN7 309 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 ANKRD6Q9Y2G4 727 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 PCDHA13Q9Y5I0 950 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 FADS3Q9Y5Q0 445 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 KNL1Q8NG31 2342 aa20.93■□□□□ 0.94
TRIM35-203ENST00000521253 ADAMTS9Q9P2N4 1935 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 NCOR2Q9Y618 2525 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 SOWAHDA6NJG2 315 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 PCDH8O95206 1070 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 CYLC1P35663 651 aaPredicted RBP20.92■□□□□ 0.94
TRIM35-203ENST00000521253 NUDT1P36639 197 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 RGRP47804 291 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 RFTN1Q14699 578 aaPredicted RBP20.92■□□□□ 0.94
TRIM35-203ENST00000521253 SPA17Q15506 151 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms