RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NLRP4Q96MN2 994 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 FCRL4Q96PJ5 515 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 CLSTN3Q9BQT9 956 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 PHF7Q9BWX1 381 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 B3GNT4Q9C0J1 378 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 FOXP1Q9H334 677 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 EPHX3Q9H6B9 360 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 RRAGDQ9NQL2 400 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 BEX4Q9NWD9 120 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 GGA3Q9NZ52 723 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 HCN3Q9P1Z3 774 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 SEL1LQ9UBV2 794 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 ANAPC4Q9UJX5 808 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 HSF4Q9ULV5 492 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 CRYL1Q9Y2S2 319 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 SUPT6HQ7KZ85 1726 aaKnown RBP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 SPATA31E1Q6ZUB1 1445 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 MAGI3Q5TCQ9 1506 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 A0A096LPK6 155 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 TMEM272A0A1B0GTI8 110 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 C17orf113A0A1B0GUU1 675 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 A0A1W2PPC1 479 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 TARSL2A2RTX5 802 aaKnown RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 GAGE10A6NGK3 116 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 TEX22C9J3V5 150 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 FAM157AC9JC47 383 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 MMP3P08254 477 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 HSPA5P11021 654 aaKnown RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 ENO3P13929 434 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 TNFSF8P32971 234 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 ANP32AP39687 249 aaKnown RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 DPP6P42658 865 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 GPR12P47775 334 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 IRX6P78412 446 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 CALD1Q05682 793 aaKnown RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 GPR68Q15743 365 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 SYTL3Q4VX76 610 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 INTS11Q5TA45 600 aaKnown RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 NAPEPLDQ6IQ20 393 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 CCDC70Q6NSX1 233 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 PARM1Q6UWI2 310 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 IL20RBQ6UXL0 311 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 COLCA1Q6ZS62 124 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 PRSS45Q7RTY3 260 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 SERPINA11Q86U17 422 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 FAM217AQ8IXS0 508 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 CPXM2Q8N436 756 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 NAXEQ8NCW5 288 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZNF548Q8NEK5 533 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 DNAAF1Q8NEP3 725 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 TMEM170AQ8WVE7 144 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 LPAR1Q92633 364 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 FRAT1Q92837 279 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC25A28Q96A46 364 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 PPM1MQ96MI6 270 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 EYA3Q99504 573 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 FUZQ9BT04 418 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 INTS2Q9H0H0 1204 aaKnown RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 LMAN2LQ9H0V9 348 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 MAP6D1Q9H9H5 199 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 JMJD4Q9H9V9 463 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZBTB40Q9NUA8 1239 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 IFT80Q9P2H3 777 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 TBC1D14Q9P2M4 693 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 NLKQ9UBE8 527 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 CDH22Q9UJ99 828 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 TMEM98Q9Y2Y6 226 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 RAP2CQ9Y3L5 183 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 MRC2Q9UBG0 1479 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 ABCC5O15440 1437 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
HMGB1P41-201ENST00000520234 DISP1Q96F81 1524 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 KIF21AQ7Z4S6 1674 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 RPRD2Q5VT52 1461 aaKnown RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 ARHGAP10A1A4S6 786 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 EYA2O00167 538 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 HSPB6O14558 160 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 TSPAN4O14817 238 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 PER2O15055 1255 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 KCNAB3O43448 404 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 ADAP00813 363 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 FGF2P09038 288 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 HNRNPA1P09651 372 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 CBSLP0DN79 551 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 PSG1P11464 419 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 CBSP35520 551 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 ARL1P40616 181 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 PTPN9P43378 593 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 KCNJ4P48050 445 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 POLD2P49005 469 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 CENPAP49450 140 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 CDH15P55291 814 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 RPP30P78346 268 aaKnown RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 TBX2Q13207 712 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 PTGR1Q14914 329 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 PRTGQ2VWP7 1150 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 GLIPR1L2Q4G1C9 344 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms