RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 GLIS1Q8NBF1 620 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 FLCNQ8NFG4 579 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 EXOC2Q96KP1 924 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 SLC25A51Q9H1U9 297 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 GBA3Q9H227 469 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 MTG2Q9H4K7 406 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 PCDH9Q9HC56 1237 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 PRSS16Q9NQE7 514 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 PAK5Q9P286 719 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 RSPH14Q9UHP6 348 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 MMP17Q9ULZ9 603 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 NEU2Q9Y3R4 380 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 FARP1Q9Y4F1 1045 aaPredicted RBP18.05■□□□□ 0.48
SDC2-205ENST00000520233 TTLL3Q9Y4R7 772 aa18.05■□□□□ 0.48
SDC2-205ENST00000520233 UNC80Q8N2C7 3258 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 TMEM221A6NGB7 291 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 M0R296 226 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 BNIP3LO60238 219 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 SIN3BO75182 1162 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 POP4O95707 220 aaKnown RBP18.04■□□□□ 0.48
SDC2-205ENST00000520233 KRT14P02533 472 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 HOXB2P14652 356 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 ETS1P14921 441 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 NFKB1P19838 968 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 RPL22P35268 128 aaKnown RBP18.04■□□□□ 0.48
SDC2-205ENST00000520233 MAPK8P45983 427 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 SCNN1BP51168 640 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 CCNHP51946 323 aaPredicted RBP18.04■□□□□ 0.48
SDC2-205ENST00000520233 AP1S1P61966 158 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 DSC2Q02487 901 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 CAMK2GQ13555 558 aaPredicted RBP18.04■□□□□ 0.48
SDC2-205ENST00000520233 PARP6Q2NL67 630 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 MYLK3Q32MK0 819 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 CWF19L1Q69YN2 538 aaKnown RBP18.04■□□□□ 0.48
SDC2-205ENST00000520233 DPY19L3Q6ZPD9 716 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 MAATS1Q7Z4T9 603 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 SRLQ86TD4 932 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 PRUNE1Q86TP1 453 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 ARRDC2Q8TBH0 407 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 FCRL5Q96RD9 977 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 SEMA3CQ99985 751 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 CHRDQ9H2X0 955 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 SCUBE2Q9NQ36 999 aa18.04■□□□□ 0.48
SDC2-205ENST00000520233 HECAQ9UBI9 543 aaPredicted RBP18.04■□□□□ 0.48
SDC2-205ENST00000520233 ALOX15BO15296 676 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 INSIG1O15503 277 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 SYNCRIPO60506 623 aaKnown RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 PDGFBP01127 241 aaPredicted RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 ZSCAN5DPP0CG00 497 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 MAGEA9P43362 315 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 RAD51Q06609 339 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 NIPAL4Q0D2K0 466 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 PTK6Q13882 451 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 ELAVL3Q14576 367 aaKnown RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 STARD3Q14849 445 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 SLC14A2Q15849 920 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 PKN3Q6P5Z2 889 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 NCEH1Q6PIU2 408 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 JAMLQ86YT9 394 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 RYBPQ8N488 228 aaPredicted RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 CCHCR1Q8TD31 782 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 OR8D1Q8WZ84 308 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 IMP4Q96G21 291 aaKnown RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 PPP1R2P1Q96PQ5 205 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 TUBGCP5Q96RT8 1024 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 HEPHQ9BQS7 1158 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 IER2Q9BTL4 223 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 CPEB1Q9BZB8 566 aaKnown RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 FBRSQ9HAH7 460 aa18.03■□□□□ 0.48
SDC2-205ENST00000520233 RRAGDQ9NQL2 400 aaPredicted RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 EVLQ9UI08 416 aaPredicted RBP18.03■□□□□ 0.48
SDC2-205ENST00000520233 F5P12259 2224 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.02■□□□□ 0.48
SDC2-205ENST00000520233 A0A1W2PQF6 199 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 TTC24A2A3L6 582 aaPredicted RBP18.02■□□□□ 0.48
SDC2-205ENST00000520233 FAM187AA6NFU0 413 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 TTI1O43156 1089 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 RAD51CO43502 376 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 GJB3O75712 270 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 MMP2P08253 660 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 PSMB4P28070 264 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 FDFT1P37268 417 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 GAS6Q14393 721 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 PRPSAP1Q14558 356 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 GRM3Q14832 879 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 PPP1R7Q15435 360 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 TRIP13Q15645 432 aaPredicted RBP18.02■□□□□ 0.48
SDC2-205ENST00000520233 SYT13Q7L8C5 426 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 PRPF39Q86UA1 669 aaKnown RBP18.02■□□□□ 0.48
SDC2-205ENST00000520233 STK40Q8N2I9 435 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.02■□□□□ 0.48
SDC2-205ENST00000520233 CHST14Q8NCH0 376 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 TADA1Q96BN2 335 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 LRIG1Q96JA1 1093 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 FAM129BQ96TA1 746 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 NOD2Q9HC29 1040 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 CD248Q9HCU0 757 aa18.02■□□□□ 0.48
SDC2-205ENST00000520233 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.01■□□□□ 0.47
SDC2-205ENST00000520233 METTL18O95568 372 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 SERPINF2P08697 491 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms