RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 ZBED3Q96IU2 234 aaPredicted RBP2.07□□□□□ -2.08
CCNC-208ENST00000519617 NT5C1BQ96P26 610 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 PARK7Q99497 189 aaKnown RBP2.07□□□□□ -2.08
CCNC-208ENST00000519617 SMAD5Q99717 465 aaKnown RBP2.07□□□□□ -2.08
CCNC-208ENST00000519617 PIMREGQ9BSJ6 248 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 ANP32EQ9BTT0 268 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 CINPQ9BW66 212 aaPredicted RBP2.07□□□□□ -2.08
CCNC-208ENST00000519617 LSG1Q9H089 658 aaKnown RBP2.07□□□□□ -2.08
CCNC-208ENST00000519617 FAM83DQ9H4H8 585 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 RMI1Q9H9A7 625 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 ZMAT3Q9HA38 289 aaKnown RBP2.07□□□□□ -2.08
CCNC-208ENST00000519617 MAP3K20Q9NYL2 800 aaKnown RBP2.07□□□□□ -2.08
CCNC-208ENST00000519617 PLK2Q9NYY3 685 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 NYAP2Q9P242 653 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 GABBR1Q9UBS5 961 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 CLIP2Q9UDT6 1046 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 FBXO40Q9UH90 709 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 TCEAL9Q9UHQ7 104 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 FEM1BQ9UK73 627 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 SMC3Q9UQE7 1217 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 SLC45A1Q9Y2W3 748 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 WDR90Q96KV7 1748 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 KIAA1551Q9HCM1 1747 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 PSME4Q14997 1843 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 PLIN4Q96Q06 1357 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 SBF1O95248 1867 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 AKAP11Q9UKA4 1901 aa2.07□□□□□ -2.08
CCNC-208ENST00000519617 TIAM2Q8IVF5 1701 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 A0A1B0GUL6 1792 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ECM29Q5VYK3 1845 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 DOCK2Q92608 1830 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 LOC102724159A0A0B4J2E5 919 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 KLF18A0A0U1RQI7 1052 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 CLEC18AA5D8T8 446 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 TRIM43BA6NCK2 446 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 GOLGA6L4A6NEF3 574 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 DDTLA6NHG4 134 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 FAM227AF5H4B4 570 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PYCARD-AS1I3L0S3 204 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 LINC01565O15544 149 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 GRID2O43424 1007 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PRKAB2O43741 272 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 STRNO43815 780 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PLA2G6O60733 806 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 OFD1O75665 1012 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PIAS2O75928 621 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 UBXN7O94888 489 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ZNF432O94892 652 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PAPSS2O95340 614 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 DEXIO95424 95 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 SLC25A27O95847 323 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 GH2P01242 217 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ST6GAL1P15907 406 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 MAP2K2P36507 400 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 RFX2P48378 723 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 SOX2P48431 317 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 COPAP53621 1224 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 OAZ1P54368 228 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PRMT2P55345 433 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 BACE1P56817 501 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 HUNKP57058 714 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 EVCP57679 992 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 HAND2P61296 217 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 DYNLL1P63167 89 aaKnown RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 GABPAQ06546 454 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PPIL2Q13356 520 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ZNF267Q14586 743 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 COG2Q14746 738 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PWP2Q15269 919 aaKnown RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 CCDC96Q2M329 555 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 SMTNL2Q2TAL5 461 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 DEFB115Q30KQ5 88 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 BRDTQ58F21 947 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 ATL3Q6DD88 541 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 CCDC129Q6ZRS4 1044 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 TRILQ7L0X0 811 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 RTL10Q7L3V2 364 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 SRGAP1Q7Z6B7 1085 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ADGRA1Q86SQ6 560 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ZNF589Q86UQ0 364 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 UEVLDQ8IX04 471 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ADGRF4Q8IZF3 695 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 CLEC18CQ8NCF0 446 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 IL31RAQ8NI17 732 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 TRIM43Q96BQ3 446 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 PHF21BQ96EK2 531 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ZDHHC12Q96GR4 267 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 PRR11Q96HE9 360 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 CDHR1Q96JP9 859 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 HIST1H2AAQ96QV6 131 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 SEC62Q99442 399 aaKnown RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 SLF1Q9BQI6 1058 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 WDR83Q9BRX9 315 aaKnown RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 MXD3Q9BW11 206 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 RNF26Q9BY78 433 aaPredicted RBP2.06□□□□□ -2.08
CCNC-208ENST00000519617 RAB34Q9BZG1 259 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 TMEM39BQ9GZU3 492 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 MROH8Q9H579 483 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 VCPKMTQ9H867 229 aa2.06□□□□□ -2.08
CCNC-208ENST00000519617 ATP6V0A4Q9HBG4 840 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms