RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 STX5Q13190 355 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 GRB14Q14449 540 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 POU6F1Q14863 301 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 PDCD2Q16342 344 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 KIAA0319Q5VV43 1072 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 OTOP3Q7RTS5 596 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 CENPLQ8N0S6 344 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 BHLHE22Q8NFJ8 381 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 IPMKQ8NFU5 416 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 USP33Q8TEY7 942 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 FSD1LQ9BXM9 530 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 OSBPL2Q9H1P3 480 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 EPB41L1Q9H4G0 881 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 MRM3Q9HC36 420 aaKnown RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 FNDC1Q4ZHG4 1894 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 MYBPHLA2RUH7 354 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 TARM1B6A8C7 271 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 I6L893 689 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 PTGESO14684 152 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 BCAS2O75934 225 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 TNFAIP8O95379 198 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 XRCC1P18887 633 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 HTR7P34969 479 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 GJA5P36382 358 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 RPL5P46777 297 aaKnown RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 POU4F1Q01851 419 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 CTBP1Q13363 440 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 SH2D4BQ5SQS7 431 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 USP50Q70EL3 339 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 KLHDC8BQ8IXV7 354 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 NAT14Q8WUY8 206 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 NXNL1Q96CM4 212 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 ELMO2Q96JJ3 720 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 ZFRQ96KR1 1074 aaKnown RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 HAPLN3Q96S86 360 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 PRKD2Q9BZL6 878 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 ZNF385DQ9H6B1 395 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 CATSPERBQ9H7T0 1116 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 UTP6Q9NYH9 597 aaKnown RBP11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 HACD3Q9P035 362 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 PACSIN3Q9UKS6 424 aa11.48□□□□□ -0.57
NUDCD1-203ENST00000519607 TREHO43280 583 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 CLPTM1O96005 669 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 AMHP03971 560 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 THP07101 528 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 ATP5F1P24539 256 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 PMLP29590 882 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 CD151P48509 253 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 PSEN2P49810 448 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 PKNOX1P55347 436 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 DNAJB13P59910 316 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 PTK2BQ14289 1009 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 FAM83EQ2M2I3 478 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 LDLRAD1Q5T700 205 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 TIGD7Q6NT04 549 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 KLC3Q6P597 504 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 FBXL19Q6PCT2 694 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 PLEKHH3Q7Z736 793 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 ZMIZ2Q8NF64 920 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 CALML6Q8TD86 181 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 USP13Q92995 863 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 DGCR14Q96DF8 476 aaKnown RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 DTNBP1Q96EV8 351 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 TMA16Q96EY4 203 aaKnown RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 ZFP42Q96MM3 310 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 COPS7BQ9H9Q2 264 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 GLOD4Q9HC38 313 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 PLK2Q9NYY3 685 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 GTSE1Q9NYZ3 720 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 COPG1Q9Y678 874 aaKnown RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 TRIM38O00635 465 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 FGF10O15520 208 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 DNAJA2O60884 412 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 HSPA1AP0DMV8 641 aaKnown RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 HSPA1BP0DMV9 641 aaKnown RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 GABRB3P28472 473 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 RGS2P41220 211 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 CCR10P46092 362 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 ADAM17P78536 824 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 NSUN2Q08J23 767 aaKnown RBP eCLIP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 CEACAM7Q14002 265 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 TLR1Q15399 786 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 AGAP9Q5VTM2 703 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 ARMC3Q5W041 872 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 TMEM198Q66K66 360 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 SPATA24Q86W54 205 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 DENND6AQ8IWF6 608 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 LSMEM2Q8N112 164 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 SPATA22Q8NHS9 363 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 ZSCAN18Q8TBC5 510 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 PPP1R13LQ8WUF5 828 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 DPF3Q92784 378 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 MOCOSQ96EN8 888 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 FICDQ9BVA6 458 aa11.47□□□□□ -0.57
NUDCD1-203ENST00000519607 KATNAL1Q9BW62 490 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms