RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 RFC1P35251 1148 aaPredicted RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 SLC18A2Q05940 514 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 Q5PR19 223 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 SERTAD4-AS1Q5TG53 156 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 C11orf87Q6NUJ2 197 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 R3HCC1LQ7Z5L2 792 aaKnown RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 FAM160B2Q86V87 743 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 PLD5Q8N7P1 536 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 MCPH1Q8NEM0 835 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 GDPD5Q8WTR4 605 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 KIF1BPQ96EK5 621 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 NR1H4Q96RI1 486 aaPredicted RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 MAP6D1Q9H9H5 199 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 KIAA1456Q9P272 454 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 ZNF70Q9UC06 446 aaPredicted RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 SARDHQ9UL12 918 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 COG5Q9UP83 839 aa4.76□□□□□ -1.65
SQLE-202ENST00000518604 TDRD9Q8NDG6 1382 aaKnown RBP4.76□□□□□ -1.65
SQLE-202ENST00000518604 LY6G6EA0A0G2JKS1 128 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 TEX13CA0A0J9YWL9 993 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 A0A1W2PQM1 296 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 DDTLA6NHG4 134 aaPredicted RBP4.75□□□□□ -1.65
SQLE-202ENST00000518604 TTC36A6NLP5 189 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 TAF4O00268 1085 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 SOCS2O14508 198 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 TNFSF14O43557 240 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 EPN2O95208 641 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 GALTP07902 379 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 IRF1P10914 325 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 UBL4AP11441 157 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 ZNF8P17098 575 aaPredicted RBP4.75□□□□□ -1.65
SQLE-202ENST00000518604 MAN1A1P33908 653 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 GABRB2P47870 512 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 RXRGP48443 463 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 EIF3BP55884 814 aaKnown RBP4.75□□□□□ -1.65
SQLE-202ENST00000518604 TAF11Q15544 211 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 ZNF667Q5HYK9 610 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 HEPHL1Q6MZM0 1159 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 PARM1Q6UWI2 310 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 LRRC57Q8N9N7 239 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 TMEM163Q8TC26 289 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 ADAMTS15Q8TE58 950 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 RNF183Q96D59 192 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 C1QTNF7Q9BXJ2 289 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 TTYH1Q9H313 450 aaPredicted RBP4.75□□□□□ -1.65
SQLE-202ENST00000518604 OLA1Q9NTK5 396 aaKnown RBP4.75□□□□□ -1.65
SQLE-202ENST00000518604 SPATS2LQ9NUQ6 558 aaKnown RBP4.75□□□□□ -1.65
SQLE-202ENST00000518604 PLEKHB1Q9UF11 243 aaPredicted RBP4.75□□□□□ -1.65
SQLE-202ENST00000518604 NAALADL1Q9UQQ1 740 aa4.75□□□□□ -1.65
SQLE-202ENST00000518604 ADGRF5Q8IZF2 1346 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 A0A1W2PPC1 479 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 STMND1H3BQB6 276 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 BAIAP3O94812 1187 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 NDUFB8O95169 186 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 DDX58O95786 925 aaKnown RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 TBX18O95935 607 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 HEXAP06865 529 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 HSPA1AP0DMV8 641 aaKnown RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 HSPA1BP0DMV9 641 aaKnown RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 CDK4P11802 303 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 PCNAP12004 261 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 SLC2A4P14672 509 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 CTPS1P17812 591 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 CHMP24386 653 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 CPOXP36551 454 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 CCR9P51686 369 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 LAMB3Q13751 1172 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 KLF9Q13886 244 aaPredicted RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 RABEP1Q15276 862 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 HIST2H2ACQ16777 129 aaPredicted RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 SLC9B1Q4ZJI4 515 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 PLEKHO1Q53GL0 409 aaPredicted RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 ATF7IPQ6VMQ6 1270 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 GPSM1Q86YR5 675 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 DIS3L2Q8IYB7 885 aaKnown RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 RBFAQ8N0V3 343 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 HORMAD2Q8N7B1 307 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 TEX45Q8NA69 505 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 TDRD7Q8NHU6 1098 aaKnown RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 LPAR1Q92633 364 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 ATOH1Q92858 354 aaPredicted RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 OTULINQ96BN8 352 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 KLHL29Q96CT2 875 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 MPHOSPH8Q99549 860 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 WDR77Q9BQA1 342 aaPredicted RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 KLHL31Q9H511 634 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 BRF2Q9HAW0 419 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 WDR6Q9NNW5 1121 aaKnown RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 SNTG1Q9NSN8 517 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 POT1Q9NUX5 634 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 HSPB7Q9UBY9 170 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 CAMK2AQ9UQM7 478 aa4.74□□□□□ -1.65
SQLE-202ENST00000518604 COL3A1P02461 1466 aaPredicted RBP4.74□□□□□ -1.65
SQLE-202ENST00000518604 CBY3A6NI87 242 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 TACC1O75410 805 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 CHRNB2P17787 502 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 POU1F1P28069 291 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 TTKP33981 857 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 RYKP34925 604 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms