RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 STK33Q9BYT3 514 aa8.81□□□□□ -1
PABPC1-202ENST00000517403 CCDC86Q9H6F5 360 aaKnown RBP8.81□□□□□ -1
PABPC1-202ENST00000517403 LHX3Q9UBR4 397 aa8.81□□□□□ -1
PABPC1-202ENST00000517403 DNAI1Q9UI46 699 aa8.81□□□□□ -1
PABPC1-202ENST00000517403 FADS3Q9Y5Q0 445 aa8.81□□□□□ -1
PABPC1-202ENST00000517403 KIF26BQ2KJY2 2108 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 SLC7A4O43246 635 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 TEX33O43247 280 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 RNASEH1O60930 286 aaKnown RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 RFPL3O75679 317 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 PIAS2O75928 621 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 C1QL1O75973 258 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 FGFR1OPO95684 399 aaKnown RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 LSM8O95777 96 aaKnown RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 PRB1P04280 392 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 PRKCGP05129 697 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ITGAVP06756 1048 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 SLC2A3P11169 496 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ADRB3P13945 408 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 TCF4P15884 667 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 DGKAP23743 735 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 OR1E1P30953 314 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ADRA1BP35368 520 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 PDX1P52945 283 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 GSCP56915 257 aaPredicted RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 SULT2A1Q06520 285 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 EIF2B5Q13144 721 aaKnown RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 TARDBPQ13148 414 aaKnown RBP eCLIP8.8□□□□□ -14e-57■■■□□ 14.8
PABPC1-202ENST00000517403 CLEC16AQ2KHT3 1053 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ERN2Q76MJ5 926 aaKnown RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 SETD3Q86TU7 594 aaPredicted RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 HORMAD1Q86X24 394 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 CPNE8Q86YQ8 564 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 PELI3Q8N2H9 469 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 NPWQ8N729 165 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ZNF557Q8N988 423 aaPredicted RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 ENOX1Q8TC92 643 aaKnown RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 EXOC2Q96KP1 924 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 C1orf74Q96LT6 269 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 HAPLN3Q96S86 360 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 CDC6Q99741 560 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 SPON2Q9BUD6 331 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 SYNCQ9H7C4 482 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 PDFQ9HBH1 243 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 PREBQ9HCU5 417 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ATP13A1Q9HD20 1204 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 GDF3Q9NR23 364 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 TMEM63CQ9P1W3 806 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 DKK4Q9UBT3 224 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 RAI2Q9Y5P3 530 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ANKRD11Q6UB99 2663 aaPredicted RBP8.8□□□□□ -1
PABPC1-202ENST00000517403 IGSF10Q6WRI0 2623 aa8.8□□□□□ -1
PABPC1-202ENST00000517403 ASXL3Q9C0F0 2248 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 ILVBLA1L0T0 632 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 LGALS16A8MUM7 142 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 PES1O00541 588 aaKnown RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 AREL1O15033 823 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 SCAMP1O15126 338 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 MUSKO15146 869 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 LDOC1O95751 146 aaPredicted RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 THEGLP0DJG4 465 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 GM2AP17900 193 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 EEF1GP26641 437 aaKnown RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 NRG1Q02297 640 aaPredicted RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 PTPRRQ15256 657 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 TCEA2Q15560 299 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 TPD52L1Q16890 204 aaPredicted RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 FAM182AQ5T1J6 154 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 WDR59Q6PJI9 974 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 ARHGAP36Q6ZRI8 547 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 ZDHHC17Q8IUH5 632 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 TMIEQ8NEW7 156 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 FAM172AQ8WUF8 416 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 HMCESQ96FZ2 354 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 C2orf49Q9BVC5 232 aaPredicted RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 CALN1Q9BXU9 219 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 ZYG11BQ9C0D3 744 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 ZDHHC6Q9H6R6 413 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 ERVMER34-1Q9H9K5 563 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 MBNL1Q9NR56 388 aaKnown RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 TMEM248Q9NWD8 314 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 MAP10Q9P2G4 905 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 PPARGC1AQ9UBK2 798 aaKnown RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 IL36AQ9UHA7 158 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 LIMA1Q9UHB6 759 aaKnown RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 STAP1Q9ULZ2 295 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 COQ6Q9Y2Z9 468 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 SMG1Q96Q15 3661 aaKnown RBP8.79□□□□□ -1
PABPC1-202ENST00000517403 ACACAQ13085 2346 aa8.79□□□□□ -1
PABPC1-202ENST00000517403 A0A087WV48 116 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 IGLON5A6NGN9 336 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 C1QTNF3-AMACRE9PGA6 284 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 PRAMEF26H0Y7S4 382 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 GCATO75600 419 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 TMCC1O94876 653 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 PIGNO95427 931 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 PAK4O96013 591 aaPredicted RBP8.78□□□□□ -1
PABPC1-202ENST00000517403 UGT2B4P06133 528 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 PLEKP08567 350 aaPredicted RBP8.78□□□□□ -1
PABPC1-202ENST00000517403 ITGB7P26010 798 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms