RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 MMP3P08254 477 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 NCAM1P13591 858 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 RAB10P61026 200 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 PTK2BQ14289 1009 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 PRPSAP1Q14558 356 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 UGP2Q16851 508 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 PABPC1LQ4VXU2 614 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 XKR4Q5GH76 650 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 IYDQ6PHW0 289 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 OTOP3Q7RTS5 596 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 DENND6AQ8IWF6 608 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 ANKRD13AQ8IZ07 590 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 SPATA6LQ8N4H0 392 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 NXNL1Q96CM4 212 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 OMDQ99983 421 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 ATXN10Q9UBB4 475 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 PIN4Q9Y237 131 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 MYOCOSA0A1B0GUC4 107 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 C9IYK1 514 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 PDLIM1O00151 329 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 SDHDO14521 159 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 RNASEH2AO75792 299 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 ASLP04424 464 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 FAM58BPP0C7Q3 252 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 FAM200BP0CF97 657 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 HSPA1AP0DMV8 641 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 HSPA1BP0DMV9 641 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 DNAJB2P25686 324 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 GJA9P57773 515 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 MPP1Q00013 466 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 CTBP1Q13363 440 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 USP41Q3LFD5 358 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 ARL13BQ3SXY8 428 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 KIAA0319Q5VV43 1072 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 WSCD1Q658N2 575 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 B3GNT6Q6ZMB0 384 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 LINC00523Q86TU6 105 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 CNTN4Q8IWV2 1026 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 PPP1R13LQ8WUF5 828 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 COLEC11Q9BWP8 271 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 UNKQ9C0B0 810 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 SUDS3Q9H7L9 328 aaPredicted RBP17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 OR12D3Q9UGF7 316 aa17.03■□□□□ 0.32
TSPAN17-209ENST00000515708 TRPC5OSA6NMA1 111 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 TRIM38O00635 465 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 STRNO43815 780 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 STMN1P16949 149 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 YBX3P16989 372 aaKnown RBP eCLIP17.02■□□□□ 0.321e-6■■□□□ 11.7
TSPAN17-209ENST00000515708 CREB5Q02930 508 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 PPIL2Q13356 520 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 APOFQ13790 326 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 PCBP1Q15365 356 aaKnown RBP eCLIP17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 MYLK3Q32MK0 819 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 SH2D4BQ5SQS7 431 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 PKN3Q6P5Z2 889 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 GPRIN1Q7Z2K8 1008 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 TRIM74Q86UV6 250 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 TRIM73Q86UV7 250 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 ZFP28Q8NHY6 868 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 PGAP3Q96FM1 320 aaPredicted RBP17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 CELF6Q96J87 481 aaKnown RBP17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 NCKIPSDQ9NZQ3 722 aa17.02■□□□□ 0.32
TSPAN17-209ENST00000515708 FAM95CA0A1B0GW59 222 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 UNCXA6NJT0 531 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 NPHS1O60500 1241 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 LRIG2O94898 1065 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 HOXD8P13378 290 aaPredicted RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 CDC42EP1Q00587 391 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 LRRC23Q53EV4 343 aaPredicted RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 PCID2Q5JVF3 399 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 CTU1Q7Z7A3 348 aaKnown RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 PELI3Q8N2H9 469 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 ZNF513Q8N8E2 541 aaPredicted RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 CEP70Q8NHQ1 597 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 SPATA22Q8NHS9 363 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 ASB9Q96DX5 294 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 SLC2A11Q9BYW1 496 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 SENP6Q9GZR1 1112 aaPredicted RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 MRPL46Q9H2W6 279 aaKnown RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 CHCHD3Q9NX63 227 aaKnown RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 ADA2Q9NZK5 511 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 CNOT11Q9UKZ1 510 aaKnown RBP17.02■□□□□ 0.31
TSPAN17-209ENST00000515708 CCDC160A6NGH7 325 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 RRN3P2A6NIE6 340 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 KCNU1A8MYU2 1149 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 USP17L7P0C7H9 530 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 SMPD1P17405 629 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 POU6F1Q14863 301 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 DGKDQ16760 1214 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 IL23RQ5VWK5 629 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 PAOXQ6QHF9 649 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 GK5Q6ZS86 529 aa17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 FASTKD5Q7L8L6 764 aaKnown RBP17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 PIWIL4Q7Z3Z4 852 aaKnown RBP17.01■□□□□ 0.31
TSPAN17-209ENST00000515708 KLHDC8BQ8IXV7 354 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms