RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 GLP2RO95838 553 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 ADRA1DP25100 572 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 OAS2P29728 719 aaKnown RBP16.21■□□□□ 0.19
NUP54-214ENST00000514307 NNMTP40261 264 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 VIPR2P41587 438 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 SCNN1BP51168 640 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 MAXP61244 160 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 SKOR1P84550 965 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 DSC2Q02487 901 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 CDK18Q07002 472 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 FRG1Q14331 258 aaKnown RBP16.21■□□□□ 0.19
NUP54-214ENST00000514307 DHCR24Q15392 516 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 PLEKHG6Q3KR16 790 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 GET4Q7L5D6 327 aaPredicted RBP16.21■□□□□ 0.19
NUP54-214ENST00000514307 NLRP9Q7RTR0 991 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 PGBD5Q8N414 524 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 ARFGAP2Q8N6H7 521 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 CDKL2Q92772 493 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 ATP2A3Q93084 1043 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 TTC17Q96AE7 1141 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 FEM1CQ96JP0 617 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 MRGPRX2Q96LB1 330 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 NECTIN4Q96NY8 510 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 S1PR5Q9H228 398 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 VPS18Q9P253 973 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 SLC25A13Q9UJS0 675 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 SLC8A2Q9UPR5 921 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.2■□□□□ 0.18
NUP54-214ENST00000514307 LOC285095A0A1B0GVY8 99 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 HEPACAM2A8MVW5 462 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 POC1B-GALNT4F8VUJ3 575 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 SNAP91O60641 907 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 USP12O75317 370 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 ALADP13716 330 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 POLR2EP19388 210 aaKnown RBP16.2■□□□□ 0.18
NUP54-214ENST00000514307 HLA-DPA1P20036 260 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 GLDCP23378 1020 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 SERPINH1P50454 418 aaKnown RBP16.2■□□□□ 0.18
NUP54-214ENST00000514307 RHOAP61586 193 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 ARF5P84085 180 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 LONRF1Q17RB8 773 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 CTC1Q2NKJ3 1217 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 PREPLQ4J6C6 727 aaPredicted RBP16.2■□□□□ 0.18
NUP54-214ENST00000514307 PITRM1Q5JRX3 1037 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 UNC5AQ6ZN44 842 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 CAPN12Q6ZSI9 719 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 EP400NLQ6ZTU2 488 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 TAOK1Q7L7X3 1001 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 MFSD6LQ8IWD5 586 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 APCDD1Q8J025 514 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 PPHLN1Q8NEY8 458 aaKnown RBP16.2■□□□□ 0.18
NUP54-214ENST00000514307 GABPB2Q8TAK5 448 aaPredicted RBP16.2■□□□□ 0.18
NUP54-214ENST00000514307 ISG20Q96AZ6 181 aaKnown RBP16.2■□□□□ 0.18
NUP54-214ENST00000514307 ARL8AQ96BM9 186 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 ADGRE3Q9BY15 652 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 CLDND1Q9NY35 253 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 CLEC1BQ9P126 229 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 GGA2Q9UJY4 613 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 FBXO10Q9UK96 956 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 MTCH2Q9Y6C9 303 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 FAM169AQ9Y6X4 670 aa16.2■□□□□ 0.18
NUP54-214ENST00000514307 GBF1Q92538 1859 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 TCRBV9S1A1TA0A576 114 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 SMIM23A6NLE4 172 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 A6NNZ2 444 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 HOXC11O43248 304 aaPredicted RBP16.19■□□□□ 0.18
NUP54-214ENST00000514307 ATP9BO43861 1147 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 USP1O94782 785 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 ALDH1A2O94788 518 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 TMCC1O94876 653 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 MMP2P08253 660 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 ADH5P11766 374 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 PABPC1P11940 636 aaKnown RBP16.19■□□□□ 0.18
NUP54-214ENST00000514307 TPH1P17752 444 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 GBP2P32456 591 aaPredicted RBP16.19■□□□□ 0.18
NUP54-214ENST00000514307 CD70P32970 193 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 AP1S1P61966 158 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 ECT2LQ008S8 904 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 RAD51Q06609 339 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 MTM1Q13496 603 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 NAB1Q13506 487 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 PCSK7Q16549 785 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 EML3Q32P44 896 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 TUBB8Q3ZCM7 444 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 CERCAMQ5T4B2 595 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 STEAP4Q687X5 459 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 DENND5AQ6IQ26 1287 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 PKN3Q6P5Z2 889 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 LINGO4Q6UY18 593 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 KDELC2Q7Z4H8 507 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 SRLQ86TD4 932 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 TMEM135Q86UB9 458 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 LRRC6Q86X45 466 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 AHI1Q8N157 1196 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.19■□□□□ 0.18
NUP54-214ENST00000514307 WFIKKN2Q8TEU8 576 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 LMLNQ96KR4 655 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 RANBP9Q96S59 729 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 APOL2Q9BQE5 337 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 KIFC1Q9BW19 673 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms