RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 C1QTNF2Q9BXJ5 285 aa12.29□□□□□ -0.44
PTPN20-229ENST00000513756 TCEAL2Q9H3H9 227 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-229ENST00000513756 FAM204AQ9H8W3 233 aa12.29□□□□□ -0.44
PTPN20-229ENST00000513756 AKAP7Q9P0M2 348 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-229ENST00000513756 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
PTPN20-229ENST00000513756 TBC1D30Q9Y2I9 924 aa12.29□□□□□ -0.44
PTPN20-229ENST00000513756 TEP1Q99973 2627 aaKnown RBP12.29□□□□□ -0.44
PTPN20-229ENST00000513756 SCN8AQ9UQD0 1980 aa12.29□□□□□ -0.44
PTPN20-229ENST00000513756 K7ERQ8 282 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 NEMP1O14524 444 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 RHOBTB3O94955 611 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 WT1P19544 449 aaPredicted RBP12.28□□□□□ -0.44
PTPN20-229ENST00000513756 BRD2P25440 801 aaKnown RBP12.28□□□□□ -0.44
PTPN20-229ENST00000513756 CCR10P46092 362 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 MAPK10P53779 464 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 YWHAZP63104 245 aaKnown RBP12.28□□□□□ -0.44
PTPN20-229ENST00000513756 CDK17Q00537 523 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 PPARDQ03181 441 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
PTPN20-229ENST00000513756 DCAF17Q5H9S7 520 aaPredicted RBP12.28□□□□□ -0.44
PTPN20-229ENST00000513756 TPRG1LQ5T0D9 272 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 DPY19L3Q6ZPD9 716 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 KYQ8NBH2 561 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 RAB7BQ96AH8 199 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 SLC12A9Q9BXP2 914 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 CLPBQ9H078 707 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 SIRPGQ9P1W8 387 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 VPS51Q9UID3 782 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 VANGL2Q9ULK5 521 aa12.28□□□□□ -0.44
PTPN20-229ENST00000513756 SPTBN1Q01082 2364 aaKnown RBP12.28□□□□□ -0.44
PTPN20-229ENST00000513756 A0A1W2PQM1 296 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.27□□□□□ -0.45
PTPN20-229ENST00000513756 STMND1H3BQB6 276 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 SMAD6O43541 496 aaKnown RBP12.27□□□□□ -0.45
PTPN20-229ENST00000513756 SNAP91O60641 907 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 RHOCP08134 193 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 CTSEP14091 401 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 ITIH1P19827 911 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 GPD2P43304 727 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 ZFP36L1Q07352 338 aaKnown RBP12.27□□□□□ -0.45
PTPN20-229ENST00000513756 LRMPQ12912 555 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 C22orf39Q6P5X5 142 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 MACC1Q6ZN28 852 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 GKN2Q86XP6 184 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 CCNJLQ8IV13 435 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 STK32AQ8WU08 396 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 CATSPER2Q96P56 530 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 PSMB7Q99436 277 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 HEPHQ9BQS7 1158 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 ZSWIM1Q9BR11 485 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 C1QTNF7Q9BXJ2 289 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 TNKS2Q9H2K2 1166 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 DDIT4Q9NX09 232 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 FOXJ2Q9P0K8 574 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 GPR34Q9UPC5 381 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 WASF2Q9Y6W5 498 aa12.27□□□□□ -0.45
PTPN20-229ENST00000513756 SYNJ2BP-COX16A0A087WUM0 186 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 C9orf172C9J069 976 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 RNF225M0QZC1 329 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-229ENST00000513756 RNF103O00237 685 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 C5orf22Q49AR2 442 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 ZCWPW2Q504Y3 356 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 ERICH6BQ5W0A0 696 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 SETD3Q86TU7 594 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-229ENST00000513756 ATCAYQ86WG3 371 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 PCDH20Q8N6Y1 951 aaKnown RBP12.26□□□□□ -0.45
PTPN20-229ENST00000513756 DCAF4L2Q8NA75 395 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 PCDH19Q8TAB3 1148 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 C9orf43Q8TAL5 461 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-229ENST00000513756 GPBAR1Q8TDU6 330 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 CENPTQ96BT3 561 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 ARHGEF26Q96DR7 871 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 NT5C1BQ96P26 610 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 EPAS1Q99814 870 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 CEP44Q9C0F1 390 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 COX16Q9P0S2 106 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 APPL1Q9UKG1 709 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 HS3ST4Q9Y661 456 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 UNC13CQ8NB66 2214 aa12.26□□□□□ -0.45
PTPN20-229ENST00000513756 ZFC3H1O60293 1989 aaKnown RBP12.25□□□□□ -0.45
PTPN20-229ENST00000513756 TMEM110-MUSTN1A8MSY1 372 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 SLC16A3O15427 465 aaKnown RBP12.25□□□□□ -0.45
PTPN20-229ENST00000513756 ENDOD1O94919 500 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 PNLIPP16233 465 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 EIF4A3P38919 411 aaKnown RBP12.25□□□□□ -0.45
PTPN20-229ENST00000513756 ETV5P41161 510 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 DNA2P51530 1060 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 IRAK1P51617 712 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 HK3P52790 923 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 PITX1P78337 314 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-229ENST00000513756 C1QBPQ07021 282 aaKnown RBP12.25□□□□□ -0.45
PTPN20-229ENST00000513756 SLC20A2Q08357 652 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 CARD16Q5EG05 197 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 RETSATQ6NUM9 610 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 LINGO4Q6UY18 593 aa12.25□□□□□ -0.45
PTPN20-229ENST00000513756 PARS2Q7L3T8 475 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms