RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 C3orf70A6NLC5 250 aaPredicted RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 MEI4A8MW99 385 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 ZNF487B1APH4 448 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 H3BRJ5 948 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 AREL1O15033 823 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 VILLO15195 856 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 MAFKO60675 156 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 FSBPO95073 299 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 WNT1P04628 370 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 CFIP05156 583 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 SYPP08247 313 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 CD48P09326 243 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 ZNF883P0CG24 379 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 CD59P13987 128 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 CSRP1P21291 193 aaKnown RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 AMPD1P23109 780 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 CTSKP43235 329 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 CSNK1EP49674 416 aaKnown RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 AFF3P51826 1226 aaKnown RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 SNRPD1P62314 119 aaKnown RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 FOXK2Q01167 660 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 IL10RBQ08334 325 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 GRIK2Q13002 908 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 DPYSL3Q14195 570 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 RFTN1Q14699 578 aaPredicted RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 ZNF284Q2VY69 593 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 ZNF805Q5CZA5 627 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 PPP6R3Q5H9R7 873 aaPredicted RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 LRRC38Q5VT99 294 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 LEKR1Q6ZMV7 388 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 ARHGAP36Q6ZRI8 547 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 DGLUCYQ7Z3D6 616 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 VSIG1Q86XK7 387 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 RHOT2Q8IXI1 618 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 TMEM145Q8NBT3 493 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 PCDH19Q8TAB3 1148 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 GANCQ8TET4 914 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 RFFLQ8WZ73 363 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 FATE1Q969F0 183 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 CELF6Q96J87 481 aaKnown RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 NSMCE3Q96MG7 304 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 ZNF599Q96NL3 588 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 TM6SF2Q9BZW4 377 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.86□□□□□ -0.83
RNF4-221ENST00000513643 ZFR2Q9UPR6 939 aaKnown RBP9.86□□□□□ -0.83
RNF4-221ENST00000513643 DMTF1Q9Y222 760 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 FADS3Q9Y5Q0 445 aa9.86□□□□□ -0.83
RNF4-221ENST00000513643 ACACBO00763 2458 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 NYNRINQ9P2P1 1898 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3DA0A087WVF3 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3IA0A087WXS9 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3EA0A087X179 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3KA0A087X1G2 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 A0A1B0GVT2 93 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3FA6NER0 549 aaPredicted RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 C16orf96A6NNT2 1141 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3LB9A6J9 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 KPNA3O00505 521 aaPredicted RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 MUSKO15146 869 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 BUB1BO60566 1050 aaPredicted RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 RNGTTO60942 597 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3HP0C7X1 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 ADRB3P13945 408 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 CR2P20023 1033 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 GKP32189 559 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 RECQLP46063 649 aaPredicted RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 RGRP47804 291 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 NEK3P51956 506 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 CCDC15Q0P6D6 951 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 FGL2Q14314 439 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 PAFAH1B3Q15102 231 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 PDK2Q15119 407 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TAZQ16635 292 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 HADHQ16836 314 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 ZNF423Q2M1K9 1284 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 KIF19Q2TAC6 998 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 POM121L1PQ3SYA9 428 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 ATXN7L2Q5T6C5 722 aaPredicted RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3GQ6DHY5 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3CQ6IPX1 549 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 PARS2Q7L3T8 475 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 IQCHQ86VS3 1027 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 HORMAD1Q86X24 394 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 LRRC49Q8IUZ0 686 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TMEM139Q8IV31 216 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TBC1D3Q8IZP1 549 aaPredicted RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 MINDY1Q8N5J2 469 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TEX26Q8N6G2 289 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 PQLC3Q8N755 202 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 NETO2Q8NC67 525 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 TSEN2Q8NCE0 465 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 OR2I1PQ8NGU4 316 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 ASB12Q8WXK4 309 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 HSPH1Q92598 858 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 RAB7BQ96AH8 199 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 ECHDC3Q96DC8 303 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 GDAP1L1Q96MZ0 367 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 PSKH2Q96QS6 385 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 ZNF670Q9BS34 389 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms