RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SPDYAQ5MJ70 313 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SCARA3Q6AZY7 606 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 OR6B2Q6IFH4 312 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ERO1BQ86YB8 467 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 NKAIN4Q8IVV8 208 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZGPATQ8N5A5 531 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 RBM15BQ8NDT2 890 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 MIPOL1Q8TD10 442 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 LRRC8CQ8TDW0 803 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 BCL7CQ8WUZ0 217 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 NT5C3BQ969T7 300 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 C19orf60Q96EN9 201 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 RAX2Q96IS3 184 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 EPB41L5Q9HCM4 733 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 PTGFRNQ9P2B2 879 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 LIPGQ9Y5X9 500 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 MYOM1P52179 1685 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 MAGEB16A2A368 324 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 GOLGA8OA6NCC3 632 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM86B1E9PN63 330 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 GOLGA8NF8WBI6 632 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 J3KTA2 159 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 O00370 1275 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 WNT10BO00744 389 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 MFN2O95140 757 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 PCCBP05166 539 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM86B2P0C5J1 330 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 UQCRFS1P1P0C7P4 283 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 MALP21145 153 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 RPL9P32969 192 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 LMAN1P49257 510 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 DGKEP52429 567 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 ALDH18A1P54886 795 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 B2MP61769 119 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 TUBA1BP68363 451 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 RPP38P78345 283 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 TNK2Q07912 1038 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 TSTA3Q13630 321 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 ALCAMQ13740 583 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 SGCBQ16585 318 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 PRRT3Q5FWE3 981 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 HERC4Q5GLZ8 1057 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 C10orf120Q5SQS8 335 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 C6orf163Q5TEZ5 329 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 KDM7AQ6ZMT4 941 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 TRIM72Q6ZMU5 477 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 USP30Q70CQ3 517 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 TUBA1AQ71U36 451 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 GAREM2Q75VX8 874 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 KCTD20Q7Z5Y7 419 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 PLD5Q8N7P1 536 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 OR6B3Q8NGW1 331 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 GLMPQ8WWB7 406 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 FBXL18Q96ME1 805 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 RBM15Q96T37 977 aaKnown RBP eCLIP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 RAD9AQ99638 391 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 DBNDD2Q9BQY9 259 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 MLPHQ9BV36 600 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 MRPL37Q9BZE1 423 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 TFB2MQ9H5Q4 396 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 C17orf75Q9HAS0 396 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 MBNL1Q9NR56 388 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 KLC4Q9NSK0 619 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 TMEM184CQ9NVA4 438 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 IL20Q9NYY1 176 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 FBXW2Q9UKT8 454 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 SPACA6W5XKT8 324 aa6.4□□□□□ -1.38
TRAPPC11-209ENST00000512476 ACEP12821 1306 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 EVC2Q86UK5 1308 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 C2orf92A0A1B0GVN3 265 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 OR2AG2A6NM03 316 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 HSBP1L1C9JCN9 74 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 RNF225M0QZC1 329 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 QSOX1O00391 747 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 RPP40O75818 363 aaKnown RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 ERLIN2O94905 339 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRPF6O94906 941 aaKnown RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 DDCP20711 480 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 CD27P26842 260 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 ARHGAP25P42331 645 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 PLCD1P51178 756 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 KIAA1024LP59773 190 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 HABP4Q5JVS0 413 aaKnown RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 GALNT18Q6P9A2 607 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 RBPMS2Q6ZRY4 209 aaKnown RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 KLHL7Q8IXQ5 586 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 EFCAB13Q8IY85 973 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 LPCAT1Q8NF37 534 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 SNIP1Q8TAD8 396 aaKnown RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 RAPGEF4Q8WZA2 1011 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 DLG3Q92796 817 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 BCL2L2Q92843 193 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 DPYSL5Q9BPU6 564 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 DPH1Q9BZG8 443 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 EGLN1Q9GZT9 426 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 PKD2L1Q9P0L9 805 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 RWDD3Q9Y3V2 267 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 GMEB1Q9Y692 573 aa6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 LRPPRCP42704 1394 aaKnown RBP6.4□□□□□ -1.39
TRAPPC11-209ENST00000512476 DLC1Q96QB1 1528 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms