RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	SNX19	Q92543	992 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	P3H4	Q92791	437 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	P2RY11	Q96G91	374 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	TOE1	Q96GM8	510 aa	Known RBP	7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	MYO19	Q96H55	970 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	CELF6	Q96J87	481 aa	Known RBP	7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	ZNF641	Q96N77	438 aa	Predicted RBP	7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	RNF157	Q96PX1	679 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	TUBGCP5	Q96RT8	1024 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	C1QTNF7	Q9BXJ2	289 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	NUSAP1	Q9BXS6	441 aa	Known RBP	7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	SLC39A8	Q9C0K1	460 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	ZDHHC6	Q9H6R6	413 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	PREB	Q9HCU5	417 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	DLL3	Q9NYJ7	618 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	WSB2	Q9NYS7	404 aa	Predicted RBP	7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	HCN2	Q9UL51	889 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	PPM1H	Q9ULR3	514 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	GUCA1B	Q9UMX6	200 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	EFR3B	Q9Y2G0	817 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	FCF1	Q9Y324	198 aa	Known RBP	7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	DNAH14	Q0VDD8	3507 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	FANCM	Q8IYD8	2048 aa		7.59	□□□□□ -1.19
NR1I3-231	ENST00000512340	TBC1D3D	A0A087WVF3	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3I	A0A087WXS9	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3E	A0A087X179	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3K	A0A087X1G2	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340		A0A1W2PP55	124 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3F	A6NER0	549 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	FAM47DP	A6NHR8	397 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3L	B9A6J9	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	MID1	O15344	667 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	MT-CO1	P00395	513 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	SYP	P08247	313 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3H	P0C7X1	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	C7	P10643	843 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TGM2	P21980	687 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	CCNC	P24863	283 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ITGB7	P26010	798 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	GARS	P41250	739 aa	Known RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	CCR5	P51681	352 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	CCNH	P51946	323 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TAS2R40	P59535	323 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARF5	P84085	180 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARHGAP8	P85298	464 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	LMNB2	Q03252	620 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	BCL2L1	Q07817	233 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ITK	Q08881	620 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ELP6	Q0PNE2	266 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	SGCG	Q13326	291 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	HNRNPD	Q14103	355 aa	Known RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	LBR	Q14739	615 aa	Known RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	PAFAH1B3	Q15102	231 aa	Known RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	LPAL2	Q16609	132 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	DUOXA1	Q1HG43	343 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	SETMAR	Q53H47	684 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ZNF805	Q5CZA5	627 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARSI	Q5FYB1	569 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	DAB2IP	Q5VWQ8	1189 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	AFMID	Q63HM1	303 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3G	Q6DHY5	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3C	Q6IPX1	549 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	CCDC70	Q6NSX1	233 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	BRAT1	Q6PJG6	821 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	IL27RA	Q6UWB1	636 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	GDPD4	Q6W3E5	623 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	DPY19L3	Q6ZPD9	716 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ERN2	Q76MJ5	926 aa	Known RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ADAT2	Q7Z6V5	191 aa	Known RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TMEFF1	Q8IYR6	380 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	SUMF1	Q8NBK3	374 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ACRBP	Q8NEB7	543 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TRIM58	Q8NG06	486 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	OR52K2	Q8NGK3	314 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	OR2A12	Q8NGT7	310 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	OR14C36	Q8NHC7	312 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	FAM174A	Q8TBP5	190 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	GRIN3A	Q8TCU5	1115 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TSC1	Q92574	1164 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	PIGK	Q92643	395 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	FATE1	Q969F0	183 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	RNF25	Q96BH1	459 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	FAF2	Q96CS3	445 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	RMDN1	Q96DB5	314 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ERLEC1	Q96DZ1	483 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ZNF419	Q96HQ0	510 aa	Predicted RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	FEM1C	Q96JP0	617 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	PPP1R2P1	Q96PQ5	205 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	PSKH2	Q96QS6	385 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	FAM129B	Q96TA1	746 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	GPR174	Q9BXC1	333 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	HDAC8	Q9BY41	377 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	CPEB1	Q9BZB8	566 aa	Known RBP	7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	TM6SF2	Q9BZW4	377 aa		7.58	□□□□□ -1.2
NR1I3-231	ENST00000512340	ZDHHC5	Q9C0B5	715 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms