RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 CST6Q15828 149 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 TTC31Q49AM3 519 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-227ENST00000510951 ARSIQ5FYB1 569 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 MARC1Q5VT66 337 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 BZW1Q7L1Q6 419 aaKnown RBP10.56□□□□□ -0.72
NR1I3-227ENST00000510951 DSG4Q86SJ6 1040 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 LONP2Q86WA8 852 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 LRRC49Q8IUZ0 686 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 FAM160A2Q8N612 972 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-227ENST00000510951 PIP4K2CQ8TBX8 421 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 GANCQ8TET4 914 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 COG1Q8WTW3 980 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 MAML1Q92585 1016 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 ISG20Q96AZ6 181 aaKnown RBP10.56□□□□□ -0.72
NR1I3-227ENST00000510951 C16orf45Q96MC5 204 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-227ENST00000510951 TSGA13Q96PP4 275 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 FAM129BQ96TA1 746 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 NAPGQ99747 312 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-227ENST00000510951 HEPHQ9BQS7 1158 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 KCND1Q9NSA2 647 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 RBM22Q9NW64 420 aaKnown RBP eCLIP10.56□□□□□ -0.72
NR1I3-227ENST00000510951 SMARCAL1Q9NZC9 954 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 SARDHQ9UL12 918 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 CYP8B1Q9UNU6 501 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 WASF2Q9Y6W5 498 aa10.56□□□□□ -0.72
NR1I3-227ENST00000510951 RALGAPA1Q6GYQ0 2036 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 A0A1W2PP55 124 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 F5H423 210 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-227ENST00000510951 ZNF185O15231 689 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 FANCGO15287 622 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 ADH1BP00325 375 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 JCHAINP01591 159 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 PRNPP04156 253 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 UGT2B4P06133 528 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 RBP3P10745 1247 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SLC8A1P32418 973 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SCNN1BP51168 640 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 RENBPP51606 427 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 NRLP54845 237 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 DSC2Q02487 901 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SNX1Q13596 522 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 LONRF2Q1L5Z9 754 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 MYLK3Q32MK0 819 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 HS1BP3Q53T59 392 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SLC45A4Q5BKX6 768 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 DARS2Q6PI48 645 aaKnown RBP10.55□□□□□ -0.72
NR1I3-227ENST00000510951 WDR5BQ86VZ2 330 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 CDKL3Q8IVW4 592 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-227ENST00000510951 AADATQ8N5Z0 425 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 FRMD1Q8N878 549 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 UBE2Q2Q8WVN8 375 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 C1orf54Q8WWF1 131 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 MS4A14Q96JA4 679 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SPACA7Q96KW9 195 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 PSKH2Q96QS6 385 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 OSBPL9Q96SU4 736 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 MGME1Q9BQP7 344 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 PABPC3Q9H361 631 aaKnown RBP10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SCUBE2Q9NQ36 999 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 FAM86C1Q9NVL1 165 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 ZSCAN32Q9NX65 697 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SERGEFQ9UGK8 458 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 EBF1Q9UH73 591 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 RAPGEFL1Q9UHV5 662 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 PPM1HQ9ULR3 514 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 SNX12Q9UMY4 172 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 R4GN57 208 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 PLXNA2O75051 1894 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 TRPM6Q9BX84 2022 aa10.55□□□□□ -0.72
NR1I3-227ENST00000510951 MYLKQ15746 1914 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 CTAGE9A4FU28 777 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 HACD1B0YJ81 288 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 KCNN4O15554 427 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 RNASEH2AO75792 299 aaKnown RBP10.54□□□□□ -0.72
NR1I3-227ENST00000510951 RPP40O75818 363 aaKnown RBP10.54□□□□□ -0.72
NR1I3-227ENST00000510951 C5AR1P21730 350 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 BCKDHBP21953 392 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 PTPN3P26045 913 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 RBL1P28749 1068 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 HOXA6P31267 233 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 HSPA9P38646 679 aaKnown RBP10.54□□□□□ -0.72
NR1I3-227ENST00000510951 TPMTP51580 245 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 IFI35P80217 286 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-227ENST00000510951 RAD51Q06609 339 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 XRCC4Q13426 336 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 HNRNPDQ14103 355 aaKnown RBP10.54□□□□□ -0.72
NR1I3-227ENST00000510951 ZNF528Q3MIS6 628 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 USP39Q53GS9 565 aaKnown RBP10.54□□□□□ -0.72
NR1I3-227ENST00000510951 LRRC73Q5JTD7 316 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 FAM46CQ5VWP2 391 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 SYT10Q6XYQ8 523 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 PARS2Q7L3T8 475 aaKnown RBP10.54□□□□□ -0.72
NR1I3-227ENST00000510951 SRLQ86TD4 932 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 HDDC3Q8N4P3 179 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 TEX26Q8N6G2 289 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 PAF1Q8N7H5 531 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
NR1I3-227ENST00000510951 HTR3CQ8WXA8 447 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms