RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 PARP9Q8IXQ6 854 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 KIF2BQ8N4N8 673 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 PDZD8Q8NEN9 1154 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 PPHLN1Q8NEY8 458 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 OR6Y1Q8NGX8 325 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 GPR152Q8TDT2 470 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 INPP5DQ92835 1189 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 IGSF8Q969P0 613 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 AZIN2Q96A70 460 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 KLHL29Q96CT2 875 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 IMP4Q96G21 291 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 SCLYQ96I15 445 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 IGSF21Q96ID5 467 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 VPS39Q96JC1 886 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF778Q96MU6 729 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 TOX2Q96NM4 488 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 TMEM237Q96Q45 408 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 RANBP9Q96S59 729 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 AGAP2Q99490 1192 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 FAM167BQ9BTA0 163 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 HERC2P3Q9BVR0 1158 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 FSD1LQ9BXM9 530 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 UBE2OQ9C0C9 1292 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 STN1Q9H668 368 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 RETREG1Q9H6L5 497 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 CWH43Q9H720 699 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 CCSER2Q9H7U1 834 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 SP110Q9HB58 689 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 RC3H2Q9HBD1 1191 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 PDFQ9HBH1 243 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 ARNT2Q9HBZ2 717 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 SAR1AQ9NR31 198 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 CHRAC1Q9NRG0 131 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 IARS2Q9NSE4 1012 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 KLC4Q9NSK0 619 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 THAP1Q9NVV9 213 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 HSFX1Q9UBD0 423 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 COPG2Q9UBF2 871 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 AFF4Q9UHB7 1163 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 DCDC2Q9UHG0 476 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 LNPEPQ9UIQ6 1025 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 DCTN4Q9UJW0 460 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 TBX21Q9UL17 535 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 ANKRD6Q9Y2G4 727 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC27A5Q9Y2P5 690 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 CDY1Q9Y6F8 540 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 MRPL42Q9Y6G3 142 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 NUMBLQ9Y6R0 609 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 TTC3P53804 2025 aa4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 FNDC1Q4ZHG4 1894 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-214ENST00000510099 PCNTO95613 3336 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 A0A096LPK6 155 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 HEATR9A2RTY3 570 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TMEM114B3SHH9 223 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 NT5C1B-RDH14C9J2C7 533 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 F5H5T6 163 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 G3V2L1 256 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 H3BNC9 293 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 J3KR12 359 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 FCHO1O14526 889 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 HGSO14964 777 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PRAMEF11O60813 436 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 H2AFYO75367 372 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PMPCBO75439 489 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 NEBLO76041 1014 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PAPSS2O95340 614 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CBX6O95503 412 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SOD2P04179 222 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 C2P06681 752 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 APOA4P06727 396 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 F7P08709 466 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ATXN1LP0C7T5 689 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 NEFHP12036 1026 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CCL5P13501 91 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ALOX15P16050 662 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 HMGA1P17096 107 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PAMP19021 973 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 GRK2P25098 689 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 HOXD9P28356 352 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 GABRB3P28472 473 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SERPINB3P29508 390 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ARRB2P32121 409 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 RFC2P35250 354 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CD86P42081 329 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC1A2P43004 574 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CHRNA4P43681 627 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ABCG1P45844 678 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CD151P48509 253 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 HARS2P49590 506 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 RENBPP51606 427 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 KCNQ1P51787 676 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CCL23P55773 120 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 YBEYP58557 167 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MPP1Q00013 466 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 IRF9Q00978 393 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 DSC2Q02487 901 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC10A7Q0GE19 358 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 STX3Q13277 289 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MSLNQ13421 630 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms