RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 PIGNO95427 931 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 PEX11BO96011 259 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 UGT2B4P06133 528 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 SERPINF2P08697 491 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3HP0C7X1 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TNNT1P13805 278 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 SEMG2Q02383 582 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 SLC10A7Q0GE19 358 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 KRT81Q14533 505 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 LLGL1Q15334 1064 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 MYLK3Q32MK0 819 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 WDR45BQ5MNZ6 344 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 PRAMEF14Q5SWL7 426 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 SEL1L3Q68CR1 1132 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 NCBP2-AS2Q69YL0 99 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3GQ6DHY5 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3CQ6IPX1 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 ZSWIM9Q86XI8 627 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3Q8IZP1 549 aaPredicted RBP13.78□□□□□ -0.2
SNF8-206ENST00000509989 PGBD5Q8N414 524 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TSEN2Q8NCE0 465 aaKnown RBP13.78□□□□□ -0.2
SNF8-206ENST00000509989 OR2AP1Q8NGE2 309 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 OR2T34Q8NGX1 318 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 RFFLQ8WZ73 363 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 ISG20Q96AZ6 181 aaKnown RBP13.78□□□□□ -0.2
SNF8-206ENST00000509989 KLHL32Q96NJ5 620 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 MYOCQ99972 504 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 UBA2Q9UBT2 640 aaPredicted RBP13.78□□□□□ -0.2
SNF8-206ENST00000509989 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
SNF8-206ENST00000509989 HPCAL4Q9UM19 191 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 SLC6A14Q9UN76 642 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 ZFR2Q9UPR6 939 aaKnown RBP13.78□□□□□ -0.2
SNF8-206ENST00000509989 CACNA1AO00555 2505 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 C3orf70A6NLC5 250 aaPredicted RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 PRR5-ARHGAP8B1AHC4 643 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 EIF3CLB5ME19 914 aaKnown RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 C1QTNF3-AMACRE9PGA6 284 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 GIPC1O14908 333 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 BCAT2O15382 392 aaPredicted RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 GSRP00390 522 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 PRKCGP05129 697 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 PRLRP16471 622 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 COMTP21964 271 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 HTR7P34969 479 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 ARL4AP40617 200 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 MARCKSL1P49006 195 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 RHOAP61586 193 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 ARHGAP8P85298 464 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 SLC10A2Q12908 348 aaPredicted RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 GRIK2Q13002 908 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 FGL2Q14314 439 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 IHHQ14623 411 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 UAP1L1Q3KQV9 507 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 ANKRD20A8PQ5CZ79 823 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 SYCP2LQ5T4T6 812 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 B4GALNT4Q76KP1 1039 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 ERN2Q76MJ5 926 aaKnown RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 DSG4Q86SJ6 1040 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 NETO1Q8TDF5 533 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 EIF3CQ99613 913 aaKnown RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 CALN1Q9BXU9 219 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 FZD3Q9NPG1 666 aa13.77□□□□□ -0.21
SNF8-206ENST00000509989 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 EPN1Q9Y6I3 576 aaPredicted RBP13.77□□□□□ -0.21
SNF8-206ENST00000509989 A0A1B0GTW7 788 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 A0A1W2PPC4 97 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 LRRC72A6NJI9 287 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 C16orf96A6NNT2 1141 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 ARHGAP33O14559 1287 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 MAFKO60675 156 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 RNGTTO60942 597 aaKnown RBP13.76□□□□□ -0.21
SNF8-206ENST00000509989 NDUFA10O95299 355 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 PRNPP04156 253 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 KDELR1P24390 212 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 CD27P26842 260 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 MAN1A1P33908 653 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 RECQLP46063 649 aaPredicted RBP13.76□□□□□ -0.21
SNF8-206ENST00000509989 GBE1Q04446 702 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 TCEAL1Q15170 157 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 INO80DQ53TQ3 878 aaPredicted RBP13.76□□□□□ -0.21
SNF8-206ENST00000509989 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 TMCO3Q6UWJ1 677 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 MINDY1Q8N5J2 469 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 NCAPGQ9BPX3 1015 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
SNF8-206ENST00000509989 TRIM10Q9UDY6 481 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 SNX11Q9Y5W9 270 aa13.76□□□□□ -0.21
SNF8-206ENST00000509989 A0A1W2PQU0 124 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 A0A1W2PR77 199 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 MED19A0JLT2 244 aaPredicted RBP13.75□□□□□ -0.21
SNF8-206ENST00000509989 H0Y8X5 98 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 RAD51BO15315 384 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 LATO43561 262 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 POP4O95707 220 aaKnown RBP13.75□□□□□ -0.21
SNF8-206ENST00000509989 ADRB3P13945 408 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms