RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PIP4P1Q86T03 277 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 ZNF354CQ86Y25 554 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 TP53INP2Q8IXH6 220 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 TC2NQ8N9U0 490 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 FAM71BQ8TC56 605 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 GRIN3AQ8TCU5 1115 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 TSC1Q92574 1164 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 HSPH1Q92598 858 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 DEF6Q9H4E7 631 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 IL21RQ9HBE5 538 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 PDFQ9HBH1 243 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 ETNK2Q9NVF9 386 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 CTTNBP2NLQ9P2B4 639 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 ANKRD6Q9Y2G4 727 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 MFHAS1Q9Y4C4 1052 aa16.4■□□□□ 0.22
PDLIM5-212ENST00000509333 ARHGAP42A6NI28 874 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 KCNK3O14649 394 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 GIPC1O14908 333 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 VILLO15195 856 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 GRIA4P48058 902 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 SLC14A1Q13336 389 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 TEAD4Q15561 434 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 ATXN7L2Q5T6C5 722 aaPredicted RBP16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 IL27RAQ6UWB1 636 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 TRIM69Q86WT6 500 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 RYBPQ8N488 228 aaPredicted RBP16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 LZTR1Q8N653 840 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 NPWQ8N729 165 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 SLC35G2Q8TBE7 412 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 CTNNBL1Q8WYA6 563 aaPredicted RBP16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 SLC6A18Q96N87 628 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 CSPG4P5Q96PW8 444 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 GAREM1Q9H706 876 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 PCDH18Q9HCL0 1135 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 PREBQ9HCU5 417 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 SPTLC3Q9NUV7 552 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 SNX11Q9Y5W9 270 aa16.39■□□□□ 0.21
PDLIM5-212ENST00000509333 A0A1W2PQU0 124 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 C16orf96A6NNT2 1141 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 H3BRJ5 948 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 KRIT1O00522 736 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 INSIG1O15503 277 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 RNGTTO60942 597 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 CEACAM1P13688 526 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 ITGB7P26010 798 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 CD38P28907 300 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 MAT2AP31153 395 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 NUDT1P36639 197 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 CTSKP43235 329 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 ZNF75DP51815 510 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 TAS2R40P59535 323 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 HADHQ16836 314 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 ZNF805Q5CZA5 627 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 N4BP2L1Q5TBK1 243 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 ARHGAP36Q6ZRI8 547 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 OR6K2Q8NGY2 324 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 CPEB1Q9BZB8 566 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 ZDHHC6Q9H6R6 413 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 DYRK4Q9NR20 520 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 LHX3Q9UBR4 397 aa16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 UBA2Q9UBT2 640 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-212ENST00000509333 TLR4O00206 839 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 ZNF883P0CG24 379 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 TIMP2P16035 220 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 ARL4AP40617 200 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 TCEAL1Q15170 157 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 ZNF284Q2VY69 593 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 FBXL19Q6PCT2 694 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 LAYNQ6UX15 382 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 GDPD4Q6W3E5 623 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 DEFB124Q8NES8 71 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 MRFAP1L1Q96HT8 127 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 PPP1R16AQ96I34 528 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 FEM1CQ96JP0 617 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 SERAC1Q96JX3 654 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 KLHL32Q96NJ5 620 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 IPO11Q9UI26 975 aaKnown RBP16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 ZFR2Q9UPR6 939 aaKnown RBP16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 DMTF1Q9Y222 760 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 FADS3Q9Y5Q0 445 aa16.37■□□□□ 0.21
PDLIM5-212ENST00000509333 AP1G1O43747 822 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 SH3BP5O60239 455 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 BUB1BO60566 1050 aaPredicted RBP16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 MTA2O94776 668 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 PCDH8O95206 1070 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 UGT2B4P06133 528 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 ADRB1P08588 477 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 CD48P09326 243 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 ADRB3P13945 408 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 SSR1P43307 286 aaKnown RBP16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 CSNK1DP48730 415 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 NEK3P51956 506 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 CDH6P55285 790 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 RHOAP61586 193 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 RAD51Q06609 339 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 IL10RBQ08334 325 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 NSUN2Q08J23 767 aaKnown RBP eCLIP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms