RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 GGT7Q9UJ14 662 aa18.46■□□□□ 0.55
CLDND1-220ENST00000508902 SLC6A14Q9UN76 642 aa18.46■□□□□ 0.55
CLDND1-220ENST00000508902 ZFR2Q9UPR6 939 aaKnown RBP18.46■□□□□ 0.55
CLDND1-220ENST00000508902 PCDHA13Q9Y5I0 950 aa18.46■□□□□ 0.55
CLDND1-220ENST00000508902 DCDC2BA2VCK2 349 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 C4orf47A7E2U8 309 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 DFFAO00273 331 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 SLC7A4O43246 635 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 MAP3K6O95382 1288 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 PRNPP04156 253 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 CD27P26842 260 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 ARL4AP40617 200 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 MAGEA1P43355 309 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 CCR5P51681 352 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 GRIK2Q13002 908 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 MYLK3Q32MK0 819 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 SYCP2LQ5T4T6 812 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 FAM46CQ5VWP2 391 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 RHOT2Q8IXI1 618 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 SPC24Q8NBT2 197 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 TSEN2Q8NCE0 465 aaKnown RBP18.45■□□□□ 0.54
CLDND1-220ENST00000508902 ACRBPQ8NEB7 543 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 HDAC8Q9BY41 377 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 IPO11Q9UI26 975 aaKnown RBP18.45■□□□□ 0.54
CLDND1-220ENST00000508902 CDV3Q9UKY7 258 aaKnown RBP18.45■□□□□ 0.54
CLDND1-220ENST00000508902 HPCAL4Q9UM19 191 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 ITM2BQ9Y287 266 aa18.45■□□□□ 0.54
CLDND1-220ENST00000508902 A0A1B0GTW7 788 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 A0A1W2PPC4 97 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 ARHGAP42A6NI28 874 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 BCAT2O15382 392 aaPredicted RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 BUB1BO60566 1050 aaPredicted RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 MAFKO60675 156 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 NDUFA10O95299 355 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 PIGNO95427 931 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 UGT2B4P06133 528 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 ITIH2P19823 946 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 ITGB7P26010 798 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 MAPK8P45983 427 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 CSNK1EP49674 416 aaKnown RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 HADHBP55084 474 aaKnown RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 GEMIN4P57678 1058 aaKnown RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 RHOAP61586 193 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 FGL2Q14314 439 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 LRRC73Q5JTD7 316 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 FAM182AQ5T1J6 154 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 ERN2Q76MJ5 926 aaKnown RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 ZSWIM9Q86XI8 627 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 CCDC170Q8IYT3 715 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 PGBD5Q8N414 524 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 CEP76Q8TAP6 659 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 LRRN4Q8WUT4 740 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 CCDC114Q96M63 670 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 IL21RQ9HBE5 538 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 RCOR3Q9P2K3 495 aaPredicted RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 EPN1Q9Y6I3 576 aaPredicted RBP18.44■□□□□ 0.54
CLDND1-220ENST00000508902 DUSP10Q9Y6W6 482 aa18.44■□□□□ 0.54
CLDND1-220ENST00000508902 PCNX2A6NKB5 2137 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 A0A1B0GVT2 93 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 A0A1W2PR77 199 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 TTC24A2A3L6 582 aaPredicted RBP18.43■□□□□ 0.54
CLDND1-220ENST00000508902 LRRC72A6NJI9 287 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 KRIT1O00522 736 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 ARHGAP33O14559 1287 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 FOXD2O60548 495 aaPredicted RBP18.43■□□□□ 0.54
CLDND1-220ENST00000508902 ADRB3P13945 408 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 COMTP21964 271 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 MAT2AP31153 395 aaKnown RBP18.43■□□□□ 0.54
CLDND1-220ENST00000508902 DPP6P42658 865 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 RECQLP46063 649 aaPredicted RBP18.43■□□□□ 0.54
CLDND1-220ENST00000508902 MARCKSL1P49006 195 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 IL10RBQ08334 325 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 SLC10A7Q0GE19 358 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 SLC10A2Q12908 348 aaPredicted RBP18.43■□□□□ 0.54
CLDND1-220ENST00000508902 KRT81Q14533 505 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 HADHQ16836 314 aaKnown RBP18.43■□□□□ 0.54
CLDND1-220ENST00000508902 ANKRD20A8PQ5CZ79 823 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 SEL1L3Q68CR1 1132 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 TMCO3Q6UWJ1 677 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 CASKIN2Q8WXE0 1202 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 GDAP1L1Q96MZ0 367 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 KLHL32Q96NJ5 620 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 ZNF670Q9BS34 389 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 NUSAP1Q9BXS6 441 aaKnown RBP18.43■□□□□ 0.54
CLDND1-220ENST00000508902 LACRTQ9GZZ8 138 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 CAAP1Q9H8G2 361 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 CA5BQ9Y2D0 317 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 FADS3Q9Y5Q0 445 aa18.43■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3DA0A087WVF3 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3IA0A087WXS9 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3EA0A087X179 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3KA0A087X1G2 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3FA6NER0 549 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 C16orf96A6NNT2 1141 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3LB9A6J9 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3HP0C7X1 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 KDELR1P24390 212 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 ARHGAP25P42331 645 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 SNRPD1P62314 119 aaKnown RBP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 GBE1Q04446 702 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms