RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 C9J4A7 227 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 MAGEC1O60732 1142 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 JUPP14923 745 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 ITIH2P19823 946 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 ITPKAP23677 461 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 TMEM63BQ5T3F8 832 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 TRAF7Q6Q0C0 670 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 KREMEN2Q8NCW0 462 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 FAM46DQ8NEK8 389 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 THAP11Q96EK4 314 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 FAIM2Q9BWQ8 316 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 YIPF3Q9GZM5 350 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 PORCNQ9H237 461 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 EFR3BQ9Y2G0 817 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 MTF2Q9Y483 593 aaPredicted RBP9.08□□□□□ -0.96
KLHL3-209ENST00000508657 NCOA3Q9Y6Q9 1424 aa9.08□□□□□ -0.96
KLHL3-209ENST00000508657 HNRNPRO43390 633 aaKnown RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 RYKP34925 604 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SERPINH1P50454 418 aaKnown RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CRYBB1P53674 252 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 DMWDQ09019 674 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CYLC2Q14093 348 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 GRB14Q14449 540 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PFKFB4Q16877 469 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 METTL27Q8N6F8 245 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SLC9A6Q92581 669 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PRR11Q96HE9 360 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SEMA3CQ99985 751 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 TRMT61BQ9BVS5 477 aaKnown RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CCSER1Q9C0I3 900 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 VPS33BQ9H267 617 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ATXN2Q99700 1313 aaKnown RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 FAM20BO75063 409 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SLC20A2Q08357 652 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SLC30A9Q6PML9 568 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SAPCD2Q86UD0 394 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 FAM81AQ8TBF8 368 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 IRX2Q9BZI1 471 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CHMP1AQ9HD42 196 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 LIMD1Q9UGP4 676 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 A0A1W2PQ67 120 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 GRID2IPA4D2P6 1211 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CCDC154A6NI56 674 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 FPGTO14772 594 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SCGNO76038 276 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 DGKAP23743 735 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ELK3P41970 407 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PCYT1AP49585 367 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CCDC92Q53HC0 331 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 OTUD3Q5T2D3 398 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 HECTD2Q5U5R9 776 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 EMBQ6PCB8 327 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SPATA21Q7Z572 469 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 C4orf19Q8IY42 314 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 KIF2BQ8N4N8 673 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 KIAA1143Q96AT1 154 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 GRAMD1AQ96CP6 724 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 COQ7Q99807 217 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 NKX2-4Q9H2Z4 354 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 BTBD7Q9P203 1132 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SPATA2Q9UM82 520 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PCDHGA6Q9Y5G7 932 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 GMNCA6NCL1 334 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PRG2P13727 222 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 AGXTP21549 392 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PDHA2P29803 388 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 COILP38432 576 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SARSP49591 514 aaKnown RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 TAS2R50P59544 299 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 TRIP10Q15642 601 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 TMPRSS11BQ86T26 416 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 AGGF1Q8N302 714 aaeCLIP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 USB1Q9BQ65 265 aaKnown RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 RIBC2Q9H4K1 309 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 FTSJ1Q9UET6 329 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ACOT9Q9Y305 439 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PTCH2Q9Y6C5 1203 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ALKQ9UM73 1620 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ANKRD63C9JTQ0 380 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 H3BNH8 94 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ACKR2O00590 384 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 DLGAP3O95886 979 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 FTH1P02794 183 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CCNYL3P0C7X3 344 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ATP6V1B1P15313 513 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 RPIAP49247 311 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CAP1Q01518 475 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 MLLT1Q03111 559 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ITGA9Q13797 1035 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 NAB2Q15742 525 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 OLFML2BQ68BL8 750 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 TMEM86AQ8N2M4 240 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 OR5T3Q8NGG3 340 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 NCSTNQ92542 709 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ATOH1Q92858 354 aaPredicted RBP9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CLCC1Q96S66 551 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ZYG11BQ9C0D3 744 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 ALG9Q9H6U8 611 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms