RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 C9orf16Q9BUW7 83 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 SF3B5Q9BWJ5 86 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 BBS2Q9BXC9 721 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 GON7Q9BXV9 100 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PCDHAC1Q9H158 963 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 NTN4Q9HB63 628 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 EPB41L5Q9HCM4 733 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PRMT8Q9NR22 394 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PKD2L2Q9NZM6 624 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 LRIT1Q9P2V4 623 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ZNF212Q9UDV6 495 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 DNPEPQ9ULA0 475 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 CDH7Q9ULB5 785 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PPIEQ9UNP9 301 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PCDHB2Q9Y5E7 798 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 DHX29Q7Z478 1369 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 USP47Q96K76 1375 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PTPRGP23470 1445 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 A0A075B6Q4 140 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 ERICH2A1L162 156 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 OR5K4A6NMS3 321 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 CLDN3O15551 220 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 PABPC4LP0CB38 370 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 RARAP10276 462 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 CYP19A1P11511 503 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 ADH6P28332 368 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 CCND2P30279 289 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 WASP42768 502 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 OAZ1P54368 228 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 ADAM17P78536 824 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SPIBQ01892 262 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 PDCLQ13371 301 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 KRT24Q2M2I5 525 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 NDUFAF5Q5TEU4 345 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 CASC4Q6P4E1 433 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 KIAA0408Q6ZU52 694 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SLC51AQ86UW1 340 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 FAM124AQ86V42 546 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 MCATQ8IVS2 390 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 FSTL5Q8N475 847 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 FIBCD1Q8N539 461 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 PI4KAP1Q8N8J0 262 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 ANKFN1Q8N957 763 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 BCL2L2Q92843 193 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 RPGRIP1Q96KN7 1286 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 CFAP57Q96MR6 1250 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 OR1F2PQ96R84 312 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 DPH2Q9BQC3 489 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SLC26A1Q9H2B4 701 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 FBXW2Q9UKT8 454 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 PMF1-BGLAPU3KQ54 211 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 U3KQV3 271 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 BCORL1Q5H9F3 1711 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 KDM5DQ9BY66 1539 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 KDM5CP41229 1560 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 C9orf84Q5VXU9 1444 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 A0A1B0GTQ1 180 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 PRSS38A1L453 326 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 POLRMTO00411 1230 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 EIF3DO15371 548 aaKnown RBP eCLIP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SLC16A3O15427 465 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SEC24DO94855 1032 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SIX3O95343 332 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 POLR2GP62487 172 aaKnown RBP eCLIP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 XIAPP98170 497 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SPDYAQ5MJ70 313 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 TWF2Q6IBS0 349 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 GALNT18Q6P9A2 607 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 MTSS1LQ765P7 747 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 EFL1Q7Z2Z2 1120 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 ZNF573Q86YE8 665 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 KLHL7Q8IXQ5 586 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 CCDC63Q8NA47 563 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 UBLCP1Q8WVY7 318 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 COPS5Q92905 334 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 FAM71F1Q96KD3 344 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 LINC00615Q96LM1 132 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 HIPK3Q9H422 1215 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 POFUT1Q9H488 388 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 DNAJC11Q9NVH1 559 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 TJP2Q9UDY2 1190 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 PCDHA1Q9Y5I3 950 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 ARHGEF5Q12774 1597 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 SH3TC1Q8TE82 1336 aa7.63□□□□□ -1.19
PDGFRA-206ENST00000508170 ARHGEF12Q9NZN5 1544 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 FAM237BA0A1B0GVD1 139 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 GCOM1H8Y6P7 765 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 PEX1O43933 1283 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 FKTNO75072 461 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 PCDH8O95206 1070 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 KRT6BP04259 564 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 EIF2S1P05198 315 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 CYP21A2P08686 494 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 CHN1P15882 459 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 DDX5P17844 614 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 TNFRSF1AP19438 455 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 ETV5P41161 510 aa7.62□□□□□ -1.19
PDGFRA-206ENST00000508170 KRT6CP48668 564 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms