RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 POLDIP3Q9BY77 421 aaKnown RBP4.98□□□□□ -1.61
LINC01088-203ENST00000507476 PREBQ9HCU5 417 aa4.98□□□□□ -1.61
LINC01088-203ENST00000507476 MRGBPQ9NV56 204 aa4.98□□□□□ -1.61
LINC01088-203ENST00000507476 CWC25Q9NXE8 425 aaPredicted RBP4.98□□□□□ -1.61
LINC01088-203ENST00000507476 CYP3A7-CYP3A51PA0A087WV96 503 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 A0A087X0M5 115 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 A0A1B0GX30 115 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 A0A1W2PPH5 198 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 BTBD18B2RXH4 712 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 F5H0A9 414 aaPredicted RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 DHX16O60231 1041 aaKnown RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 RTN3O95197 1032 aaPredicted RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 NTSR2O95665 410 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 PLGP00747 810 aaPredicted RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 ITGA2BP08514 1039 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 CKMT1AP12532 417 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 CHRNB2P17787 502 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 ALOX12P18054 663 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 CYP3A7P24462 503 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 SLC16A2P36021 539 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 PMS2P54278 862 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 ZP1P60852 638 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 GALNT1Q10472 559 aaPredicted RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 DUSP6Q16828 381 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 RILPL1Q5EBL4 403 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 ARL13AQ5H913 290 aaPredicted RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 GPATCH4Q5T3I0 446 aaKnown RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 C9orf57Q5W0N0 161 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 SULT6B1Q6IMI4 303 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 Q6ZSV7 163 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 C16orf82Q7Z2V1 217 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 FAM71BQ8TC56 605 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 AFG1LQ8WV93 481 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 HTRA1Q92743 480 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 RRP36Q96EU6 259 aaKnown RBP4.97□□□□□ -1.61
LINC01088-203ENST00000507476 VMP1Q96GC9 406 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 MPHOSPH8Q99549 860 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 PDCL3Q9H2J4 239 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 RETREG1Q9H6L5 497 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 EPS8L2Q9H6S3 715 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 RNF146Q9NTX7 359 aa4.97□□□□□ -1.61
LINC01088-203ENST00000507476 CKAP5Q14008 2032 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 TRBV5-7A0A0A0MS05 114 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 PGPEP1LA6NFU8 196 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 C3orf70A6NLC5 250 aaPredicted RBP4.96□□□□□ -1.62
LINC01088-203ENST00000507476 AQP12BA6NM10 295 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 SMTNL1A8MU46 457 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 MCIDASD6RGH6 385 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 IPO5O00410 1097 aaKnown RBP4.96□□□□□ -1.62
LINC01088-203ENST00000507476 GLUD1P00367 558 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 CYP3A4P08684 503 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 CHMP24386 653 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 TNFSF8P32971 234 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 GLUD2P49448 558 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 AARSP49588 968 aaKnown RBP eCLIP4.96□□□□□ -1.625e-7■■■■■ 34.9
LINC01088-203ENST00000507476 ADPRHP54922 357 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 DCAF7P61962 342 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 UBE3AQ05086 875 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 PTK2BQ14289 1009 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 TMEM88Q6PEY1 159 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 TRABD2AQ86V40 505 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 MOGAT3Q86VF5 341 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 FAM217AQ8IXS0 508 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 TEX11Q8IYF3 940 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 TSPYL6Q8N831 410 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 NKAIN3Q8N8D7 197 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 AFAP1L1Q8TED9 768 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 IPO4Q8TEX9 1081 aaKnown RBP4.96□□□□□ -1.62
LINC01088-203ENST00000507476 HVCN1Q96D96 273 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 PKNOX2Q96KN3 472 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 C7orf26Q96N11 449 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 PRPF18Q99633 342 aaKnown RBP4.96□□□□□ -1.62
LINC01088-203ENST00000507476 BAG1Q99933 345 aaPredicted RBP4.96□□□□□ -1.62
LINC01088-203ENST00000507476 KATNAL1Q9BW62 490 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 FRMD8Q9BZ67 464 aaPredicted RBP4.96□□□□□ -1.62
LINC01088-203ENST00000507476 B3GNT4Q9C0J1 378 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 CATSPERBQ9H7T0 1116 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 ZWILCHQ9H900 591 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 NFKBIL1Q9UBC1 381 aaPredicted RBP4.96□□□□□ -1.62
LINC01088-203ENST00000507476 KCNG2Q9UJ96 466 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 VPS28Q9UK41 221 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 RAB21Q9UL25 225 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 SLC12A4Q9UP95 1085 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 DTX4Q9Y2E6 619 aa4.96□□□□□ -1.62
LINC01088-203ENST00000507476 AP3D1O14617 1153 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 CLGNO14967 610 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 PIP5K1BO14986 540 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 P4HA2O15460 535 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 DKC1O60832 514 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC01088-203ENST00000507476 LDB3O75112 727 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 ZBTB11O95625 1053 aaPredicted RBP4.95□□□□□ -1.62
LINC01088-203ENST00000507476 PRSS2P07478 247 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 ANXA6P08133 673 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 AKR1B1P15121 316 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 CLCN5P51795 746 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 FAM3BP58499 235 aaPredicted RBP4.95□□□□□ -1.62
LINC01088-203ENST00000507476 VAMP2P63027 116 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 COASYQ13057 564 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 MEA1Q16626 185 aa4.95□□□□□ -1.62
LINC01088-203ENST00000507476 FAM76BQ5HYJ3 339 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms