RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ZFXP17010 805 aaPredicted RBP20.18■□□□□ 0.82
SNX25-204ENST00000506896 ITPKAP23677 461 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 FOXK2Q01167 660 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 RAD51Q06609 339 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 SYCP2LQ5T4T6 812 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 LYSMD4Q5XG99 296 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 KATNAL2Q8IYT4 538 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 HDDC3Q8N4P3 179 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 RNF10Q8N5U6 811 aaKnown RBP20.18■□□□□ 0.82
SNX25-204ENST00000506896 AADATQ8N5Z0 425 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 PQLC3Q8N755 202 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 CHST14Q8NCH0 376 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 FAM131CQ96AQ9 280 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 GPR174Q9BXC1 333 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 DYRK4Q9NR20 520 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 SPTBN2O15020 2390 aa20.18■□□□□ 0.82
SNX25-204ENST00000506896 LNP1A1A4G5 178 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 MACROD2A1Z1Q3 448 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 KPNA3O00505 521 aaPredicted RBP20.17■□□□□ 0.82
SNX25-204ENST00000506896 KHNYNO15037 678 aaKnown RBP20.17■□□□□ 0.82
SNX25-204ENST00000506896 KRT86O43790 486 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 MFSD11O43934 449 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 ZRANB2O95218 330 aaKnown RBP eCLIP20.17■□□□□ 0.82
SNX25-204ENST00000506896 SEMA4FO95754 770 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 CTSLP07711 333 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 MX2P20592 715 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 ACSL1P33121 698 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 CTNNA1P35221 906 aaKnown RBP20.17■□□□□ 0.82
SNX25-204ENST00000506896 HOXD12P35452 270 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 IRX4P78413 519 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 GALNT2Q10471 571 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 CYTH1Q15438 398 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 MYLK3Q32MK0 819 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 ARSIQ5FYB1 569 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 RYBPQ8N488 228 aaPredicted RBP20.17■□□□□ 0.82
SNX25-204ENST00000506896 LRRC57Q8N9N7 239 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 GRIN3AQ8TCU5 1115 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 NSMCE1Q8WV22 266 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 OSBPL1AQ9BXW6 950 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 NEUROG2Q9H2A3 272 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 WASF2Q9Y6W5 498 aa20.17■□□□□ 0.82
SNX25-204ENST00000506896 CACNA1EQ15878 2313 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 CCDC66A2RUB6 948 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 DCDC2BA2VCK2 349 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 GRID2IPA4D2P6 1211 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 APOL1O14791 398 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 MAFKO60675 156 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 LEFTY1O75610 366 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 CCDC175P0C221 793 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 DRD3P35462 400 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 GARSP41250 739 aaKnown RBP20.16■□□□□ 0.82
SNX25-204ENST00000506896 RENBPP51606 427 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 CCZ1BP86790 482 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 CCZ1P86791 482 aaPredicted RBP20.16■□□□□ 0.82
SNX25-204ENST00000506896 GRM3Q14832 879 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 WDR45BQ5MNZ6 344 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 STPG1Q5TH74 334 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 SLC9A4Q6AI14 798 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 SLC23A3Q6PIS1 610 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 ARHGAP36Q6ZRI8 547 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 TP53INP2Q8IXH6 220 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 RCOR2Q8IZ40 523 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 BBS5Q8N3I7 341 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 NETO2Q8NC67 525 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 EXD1Q8NHP7 514 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 RNF25Q96BH1 459 aaPredicted RBP20.16■□□□□ 0.82
SNX25-204ENST00000506896 RBM41Q96IZ5 413 aaKnown RBP20.16■□□□□ 0.82
SNX25-204ENST00000506896 HSPA12BQ96MM6 686 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 ZNF830Q96NB3 372 aaPredicted RBP20.16■□□□□ 0.82
SNX25-204ENST00000506896 CINPQ9BW66 212 aaPredicted RBP20.16■□□□□ 0.82
SNX25-204ENST00000506896 KDM4CQ9H3R0 1056 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 ZDHHC6Q9H6R6 413 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 SERGEFQ9UGK8 458 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 SEPT3Q9UH03 358 aa20.16■□□□□ 0.82
SNX25-204ENST00000506896 TPX2Q9ULW0 747 aaKnown RBP20.16■□□□□ 0.82
SNX25-204ENST00000506896 ADAMTS9Q9P2N4 1935 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 LRRC72A6NJI9 287 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 METTL12A8MUP2 240 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 KRIT1O00522 736 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 ITGB7P26010 798 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 CDKN2BP42772 138 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 CSNK1DP48730 415 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 NSUN2Q08J23 767 aaKnown RBP eCLIP20.15■□□□□ 0.82
SNX25-204ENST00000506896 TFDP2Q14188 446 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 LBRQ14739 615 aaKnown RBP20.15■□□□□ 0.82
SNX25-204ENST00000506896 TAZQ16635 292 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 ATXN7L2Q5T6C5 722 aaPredicted RBP20.15■□□□□ 0.82
SNX25-204ENST00000506896 TIGD7Q6NT04 549 aaPredicted RBP20.15■□□□□ 0.82
SNX25-204ENST00000506896 ZNF662Q6ZS27 426 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 RABEPKQ7Z6M1 372 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 OR2T34Q8NGX1 318 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 UBE2Q2Q8WVN8 375 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 FATE1Q969F0 183 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 PSKH2Q96QS6 385 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 HDAC8Q9BY41 377 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
SNX25-204ENST00000506896 LHX3Q9UBR4 397 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 TRIM10Q9UDY6 481 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 PCDHA3Q9Y5H8 950 aa20.15■□□□□ 0.82
SNX25-204ENST00000506896 ASCC3Q8N3C0 2202 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms