RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 GDAP1L1Q96MZ0 367 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 CPEB1Q9BZB8 566 aaKnown RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 SLC6A17Q9H1V8 727 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 USP29Q9HBJ7 922 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 RBM22Q9NW64 420 aaKnown RBP eCLIP13.03□□□□□ -0.324e-6■■■■□ 24.3
TCOF1-210ENST00000506767 IL36AQ9UHA7 158 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 SARDHQ9UL12 918 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 SAR1BQ9Y6B6 198 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ZNF318Q5VUA4 2279 aa13.02□□□□□ -0.32
TCOF1-210ENST00000506767 EML5Q05BV3 1969 aa13.02□□□□□ -0.32
TCOF1-210ENST00000506767 H7C0C1 242 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 RNF103O00237 685 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 ZNF185O15231 689 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 INSIG1O15503 277 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 LIASO43766 372 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 PRNPP04156 253 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 TUBB4AP04350 444 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 HLA-DQB2P05538 268 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 SP9P0CG40 484 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 PTPN3P26045 913 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 ATP5OP48047 213 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 PXNP49023 591 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 OASLQ15646 514 aaKnown RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 CST6Q15828 149 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 CCNG2Q16589 344 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 RALGPS1Q5JS13 557 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 WDR5BQ86VZ2 330 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 ZSCAN30Q86W11 494 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 CREG2Q8IUH2 290 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 MMAAQ8IVH4 418 aaKnown RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 CDKL3Q8IVW4 592 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 OR6K2Q8NGY2 324 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 PIP4K2CQ8TBX8 421 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 PRCCQ92733 491 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 NKD2Q969F2 451 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 EXOC2Q96KP1 924 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 TEKT5Q96M29 485 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 NUDCD1Q96RS6 583 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 VAT1Q99536 393 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 FAM126AQ9BYI3 521 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 C10orf88Q9H8K7 445 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 NT5MQ9NPB1 228 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 ITM2CQ9NQX7 267 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 EVLQ9UI08 416 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-210ENST00000506767 DNPEPQ9ULA0 475 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 SCML1Q9UN30 329 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 ZDBF2Q9HCK1 2354 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 WDFY4Q6ZS81 3184 aa13.02□□□□□ -0.33
TCOF1-210ENST00000506767 PGRMC1O00264 195 aaKnown RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 AXIN1O15169 862 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 LEFTY1O75610 366 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 GJB3O75712 270 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 ADH1BP00325 375 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 C5AR1P21730 350 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 CES1P23141 567 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 CASQ1P31415 396 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 GKP32189 559 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 SLC8A1P32418 973 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 SCNN1BP51168 640 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 NRLP54845 237 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 MAXP61244 160 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 AP1S1P61966 158 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 RAD51Q06609 339 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 GRM3Q14832 879 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 ARSIQ5FYB1 569 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 FAM182AQ5T1J6 154 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 FAM46CQ5VWP2 391 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 HEATR6Q6AI08 1181 aaKnown RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 DARS2Q6PI48 645 aaKnown RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 NCEH1Q6PIU2 408 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 LONP2Q86WA8 852 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 PGBD3Q8N328 593 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 PRELID2Q8N945 189 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 PRSS33Q8NF86 280 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 ARRDC2Q8TBH0 407 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 C1orf54Q8WWF1 131 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 ATG4AQ8WYN0 398 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 FAM131CQ96AQ9 280 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 C16orf45Q96MC5 204 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 TUBGCP5Q96RT8 1024 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 PHOX2BQ99453 314 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 NAP1L3Q99457 506 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 PRRX2Q99811 253 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 TPSD1Q9BZJ3 242 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 POLR1EQ9GZS1 481 aaKnown RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 KCNH6Q9H252 994 aa13.01□□□□□ -0.33
TCOF1-210ENST00000506767 PABPC3Q9H361 631 aaKnown RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 USP36Q9P275 1121 aaKnown RBP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 BCCIPQ9P287 314 aaKnown RBP eCLIP13.01□□□□□ -0.33
TCOF1-210ENST00000506767 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms