RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FANCCQ00597 558 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 KLHL30Q0D2K2 578 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 SERINC3Q13530 473 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 ST3GAL2Q16842 350 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 PARP15Q460N3 678 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 SLC45A4Q5BKX6 768 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 PRAMEF14Q5SWL7 426 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 HGSNATQ68CP4 663 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 PARS2Q7L3T8 475 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 KDF1Q8NAX2 398 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 SAP25Q8TEE9 199 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 SYN2Q92777 582 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 LRIG1Q96JA1 1093 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 PEBP4Q96S96 227 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 EIF3CQ99613 913 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 EPAS1Q99814 870 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 TM6SF2Q9BZW4 377 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 TRIM7Q9C029 511 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 KLC2Q9H0B6 622 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 ISCUQ9H1K1 167 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 LRRC19Q9H756 370 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 DYRK4Q9NR20 520 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 GPATCH2LQ9NWQ4 482 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 HECAQ9UBI9 543 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 HPCAL4Q9UM19 191 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 AP4E1Q9UPM8 1137 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 APOBEC2Q9Y235 224 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 FRYQ5TBA9 3013 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 RASA4BC9J798 803 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 SLC31A1O15431 190 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 SPINT1O43278 529 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 RASA4O43374 803 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 TNFSF14O43557 240 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 CREB3O43889 395 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 MAGEC1O60732 1142 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 TMCC1O94876 653 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 POP4O95707 220 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 CAPNS1P04632 268 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 SKILP12757 684 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 HNRNPA2B1P22626 353 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 PSMA2P25787 234 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 GKP32189 559 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 ABL2P42684 1182 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 ARRB1P49407 418 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 SNRPD1P62314 119 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 IL9RQ01113 521 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 FGL2Q14314 439 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 STAT4Q14765 748 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 CA9Q16790 459 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 INAVAQ3KP66 663 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 INO80DQ53TQ3 878 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 ZNF805Q5CZA5 627 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 SEL1L3Q68CR1 1132 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 KIAA1161Q6NSJ0 714 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 LEKR1Q6ZMV7 388 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 GATAD2AQ86YP4 633 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 PSTKQ8IV42 348 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 OXR1Q8N573 874 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 PNPLA1Q8N8W4 532 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 CASKIN2Q8WXE0 1202 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 HMCESQ96FZ2 354 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 SNRNP25Q9BV90 132 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 ZDHHC6Q9H6R6 413 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 CATSPERBQ9H7T0 1116 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 PDFQ9HBH1 243 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 GPR27Q9NS67 375 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 CNOT8Q9UFF9 292 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 CA5BQ9Y2D0 317 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 FADS3Q9Y5Q0 445 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 PLXNB3Q9ULL4 1909 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 PTPRBP23467 1997 aa9.22□□□□□ -0.93
PDLIM5-209ENST00000506632 TMEM8BA6NDV4 472 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 C16orf96A6NNT2 1141 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 AREL1O15033 823 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 BUB1O43683 1085 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 LRCH4O75427 683 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 MYBL1P10243 752 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 PRLRP16471 622 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 DESP17661 470 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 PTMSP20962 102 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 MIPP30301 263 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 DNA2P51530 1060 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 NDST2P52849 883 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 UBASH3AP57075 661 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 TPI1P60174 286 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 ZBED6P86452 979 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 BNIP3Q12983 259 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 MYLK3Q32MK0 819 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 ATXN7L2Q5T6C5 722 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 ERMARDQ5T6L9 678 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 AFMIDQ63HM1 303 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 FBXL19Q6PCT2 694 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 CCNI2Q6ZMN8 369 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 GCNT7Q6ZNI0 430 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 ABI3BPQ7Z7G0 1075 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 ZSCAN30Q86W11 494 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 ARHGAP12Q8IWW6 846 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 OR13H1Q8NG92 308 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 OR6K2Q8NGY2 324 aa9.21□□□□□ -0.94
PDLIM5-209ENST00000506632 ASB12Q8WXK4 309 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms