RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ZDHHC6Q9H6R6 413 aa18.12■□□□□ 0.49
SMN1-204ENST00000506163 IPO11Q9UI26 975 aaKnown RBP18.12■□□□□ 0.49
SMN1-204ENST00000506163 LCMT1Q9UIC8 334 aa18.12■□□□□ 0.49
SMN1-204ENST00000506163 PCDH15Q96QU1 1955 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 A0A0U1RQJ8 604 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 WNT9AO14904 365 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 POP4O95707 220 aaKnown RBP18.11■□□□□ 0.49
SMN1-204ENST00000506163 CFIP05156 583 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 SNRPD1P62314 119 aaKnown RBP18.11■□□□□ 0.49
SMN1-204ENST00000506163 BNC1Q01954 994 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 PDK2Q15119 407 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 NCBP2-AS2Q69YL0 99 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 RYBPQ8N488 228 aaPredicted RBP18.11■□□□□ 0.49
SMN1-204ENST00000506163 CALN1Q9BXU9 219 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 HDAC8Q9BY41 377 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 DLL3Q9NYJ7 618 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 ALG6Q9Y672 507 aa18.11■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3DA0A087WVF3 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3IA0A087WXS9 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3EA0A087X179 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3KA0A087X1G2 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3FA6NER0 549 aaPredicted RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 LRRC72A6NJI9 287 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 PRR5-ARHGAP8B1AHC4 643 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3LB9A6J9 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 KRIT1O00522 736 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 SLC7A4O43246 635 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 MFSD11O43934 449 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 MAFKO60675 156 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 GJB3O75712 270 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3HP0C7X1 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 NOP2P46087 812 aaKnown RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 RHOAP61586 193 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 ARHGAP8P85298 464 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 IL10RBQ08334 325 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 SFSWAPQ12872 951 aaKnown RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 SLC10A2Q12908 348 aaPredicted RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3GQ6DHY5 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3CQ6IPX1 549 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 ERN2Q76MJ5 926 aaKnown RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 TBC1D3Q8IZP1 549 aaPredicted RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 TSEN2Q8NCE0 465 aaKnown RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 OR2I1PQ8NGU4 316 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 CEP76Q8TAP6 659 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 LRRN4Q8WUT4 740 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 ZNF670Q9BS34 389 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 SLC6A14Q9UN76 642 aa18.1■□□□□ 0.49
SMN1-204ENST00000506163 ASCC3Q8N3C0 2202 aaKnown RBP18.1■□□□□ 0.49
SMN1-204ENST00000506163 A0A0A6YYK5 440 aaPredicted RBP18.09■□□□□ 0.49
SMN1-204ENST00000506163 BCAT2O15382 392 aaPredicted RBP18.09■□□□□ 0.49
SMN1-204ENST00000506163 PALMO75781 387 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 MAP3K6O95382 1288 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 UGT2B4P06133 528 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 TNNT1P13805 278 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 ENGP17813 658 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 ITGB7P26010 798 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 CD27P26842 260 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 DPP6P42658 865 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 SLC1A1P43005 524 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 CCR5P51681 352 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 SLC10A7Q0GE19 358 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 PAFAH1B3Q15102 231 aaKnown RBP18.09■□□□□ 0.49
SMN1-204ENST00000506163 STPG1Q5TH74 334 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 LRRC38Q5VT99 294 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 LAYNQ6UX15 382 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 PARS2Q7L3T8 475 aaKnown RBP18.09■□□□□ 0.49
SMN1-204ENST00000506163 GDAP1L1Q96MZ0 367 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 EDEM2Q9BV94 578 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 SP110Q9HB58 689 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 TM9SF3Q9HD45 589 aa18.09■□□□□ 0.49
SMN1-204ENST00000506163 A0A1B0GTW7 788 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 A0A1W2PPC4 97 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 TTC24A2A3L6 582 aaPredicted RBP18.08■□□□□ 0.49
SMN1-204ENST00000506163 TM4SF5O14894 197 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 SPINT1O43278 529 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 LATO43561 262 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 FOXD2O60548 495 aaPredicted RBP18.08■□□□□ 0.49
SMN1-204ENST00000506163 CSNK1EP49674 416 aaKnown RBP18.08■□□□□ 0.49
SMN1-204ENST00000506163 GBE1Q04446 702 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 ZNF805Q5CZA5 627 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 PGBD5Q8N414 524 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 TPCN2Q8NHX9 752 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 NETO1Q8TDF5 533 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 KLHL32Q96NJ5 620 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 RNF157Q96PX1 679 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 DESI2Q9BSY9 194 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 NUSAP1Q9BXS6 441 aaKnown RBP18.08■□□□□ 0.49
SMN1-204ENST00000506163 KDM4CQ9H3R0 1056 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 ZFR2Q9UPR6 939 aaKnown RBP18.08■□□□□ 0.49
SMN1-204ENST00000506163 PLXNA2O75051 1894 aa18.08■□□□□ 0.49
SMN1-204ENST00000506163 CNOT1A5YKK6 2376 aaKnown RBP18.08■□□□□ 0.48
SMN1-204ENST00000506163 LRRD1A4D1F6 860 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 C16orf96A6NNT2 1141 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 C4orf47A7E2U8 309 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 ARHGAP33O14559 1287 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 SLC30A4O14863 429 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 PIGNO95427 931 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 IGSF6O95976 241 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 ADRB3P13945 408 aa18.07■□□□□ 0.48
SMN1-204ENST00000506163 GNSP15586 552 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms