RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 IGFL3Q6UXB1 125 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 RPTNQ6XPR3 784 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 LYSMD3Q7Z3D4 306 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 KDELC2Q7Z4H8 507 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ARHGAP22Q7Z5H3 698 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FAM129CQ86XR2 697 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 APCDD1Q8J025 514 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FAM177A1Q8N128 213 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FSTL5Q8N475 847 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ESX1Q8N693 406 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 CSGALNACT2Q8N6G5 542 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 OR4D9Q8NGE8 314 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FIBINQ8TAL6 211 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 GRHL3Q8TE85 626 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FAR1Q8WVX9 515 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 THAP4Q8WY91 577 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 KCTD13Q8WZ19 329 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 VOPP1Q96AW1 172 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 MTFMTQ96DP5 389 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 RPL10LQ96L21 214 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PRICKLE1Q96MT3 831 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 NT5C1BQ96P26 610 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 LENG8Q96PV6 779 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 CGRRF1Q99675 332 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 NAP1L4Q99733 375 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 C1QTNF2Q9BXJ5 285 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 SLC17A9Q9BYT1 436 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 AGXT2Q9BYV1 514 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 EDEM3Q9BZQ6 932 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 DCLK3Q9C098 648 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FBXO44Q9H4M3 255 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ACTL8Q9H568 366 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 AKIRIN1Q9H9L7 192 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ZBTB20Q9HC78 741 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FBXO8Q9NRD0 319 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF358Q9NW07 568 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 SIDT1Q9NXL6 827 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 AKAP7Q9P0M2 348 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 LRIT1Q9P2V4 623 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ORC3Q9UBD5 711 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 AJAP1Q9UKB5 411 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ITGA11Q9UKX5 1188 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 TENM1Q9UKZ4 2725 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 SSU72P8A0A1W2PR75 194 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 GOLGA6L3A6NEY3 463 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 PP2D1A8MPX8 630 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 E9PMD0 336 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 HAX1O00165 279 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 PCDH17O14917 1159 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MCF2LO15068 1137 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 FANCGO15287 622 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 INPP4BO15327 924 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 NEMFO60524 1076 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 PHACTR2O75167 634 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 KATNA1O75449 491 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 AP1G2O75843 785 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 IL18RAPO95256 599 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CPA1P15085 419 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CA5AP35218 305 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 GNL1P36915 607 aaPredicted RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RBMXP38159 391 aaKnown RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 PBX1P40424 430 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CA7P43166 264 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MAZP56270 477 aaKnown RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 EVCP57679 992 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 KCNK10P57789 538 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 ST8SIA6P61647 398 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RPS18P62269 152 aaKnown RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RBP5P82980 135 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 COG7P83436 770 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 TFAMQ00059 246 aaKnown RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 ECT2LQ008S8 904 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 EFEMP1Q12805 493 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 NR5A1Q13285 461 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 DNASE1L3Q13609 305 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 LLGL1Q15334 1064 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 KRTAP24-1Q3LI83 254 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 AMZ1Q400G9 498 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 KMT5BQ4FZB7 885 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 ADGRF1Q5T601 910 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 NKAIN2Q5VXU1 208 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 NADSYN1Q6IA69 706 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RFWD3Q6PCD5 774 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 FOXR2Q6PJQ5 311 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CEACAM20Q6UY09 585 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MEX3BQ6ZN04 569 aaKnown RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MACC1Q6ZN28 852 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 BHLHA9Q7RTU4 235 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 SLC47A2Q86VL8 602 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 BRSK2Q8IWQ3 736 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 FAM186BQ8IYM0 893 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RASEFQ8IZ41 740 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 NRSN1Q8IZ57 195 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 GALNT6Q8NCL4 622 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CCDC112Q8NEF3 446 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 OR5B17Q8NGF7 314 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 TMC2Q8TDI7 906 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CT55Q8WUE5 264 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 TMEM158Q8WZ71 300 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MBD6Q96DN6 1003 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms