RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TMEM114B3SHH9 223 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 MGRN1O60291 552 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 CCDC22O60826 627 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 HAUS5O94927 633 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 HK2P52789 917 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZBTB16Q05516 673 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 FBXW10Q5XX13 1052 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 NADSYN1Q6IA69 706 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF783Q6ZMS7 281 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 CLNKQ7Z7G1 428 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF354CQ86Y25 554 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 SLC39A11Q8N1S5 342 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 C2CD4AQ8NCU7 369 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 RFWD2Q8NHY2 731 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 PSMG2Q969U7 264 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF689Q96CS4 500 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 FEM1CQ96JP0 617 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 MECRQ9BV79 373 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 KCNK13Q9HB14 408 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 GGT7Q9UJ14 662 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 DCTN4Q9UJW0 460 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 RPL26L1Q9UNX3 145 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 J3KR12 359 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 GSRP00390 522 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 FGF1P05230 155 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 CPA3P15088 417 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 HOXB8P17481 243 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 ATN1P54259 1190 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 SLC10A7Q0GE19 358 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 ASPHQ12797 758 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 OVGP1Q12889 678 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 PLD1Q13393 1074 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 RAB33AQ14088 237 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF235Q14590 738 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 PCLAFQ15004 111 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 TAF12Q16514 161 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 TSNAXIP1Q2TAA8 658 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 SETD3Q86TU7 594 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 LGI2Q8N0V4 545 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 CLSTN3Q9BQT9 956 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 LOC285095A0A1B0GVY8 99 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 SLC7A4O43246 635 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 C2P06681 752 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 HMBSP08397 361 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 FGF3P11487 239 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 MYL4P12829 197 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 PPM1AP35813 382 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 ELF3P78545 371 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 ITKQ08881 620 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 TSTD2Q5T7W7 516 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.48■□□□□ 0.393e-7■■■■□ 23
TRAPPC11-204ENST00000505676 PARP9Q8IXQ6 854 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 MAGEC3Q8TD91 643 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 SCG3Q8WXD2 468 aaKnown RBP17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 PDFQ9HBH1 243 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 HEY2Q9UBP5 337 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 SEPT3Q9UH03 358 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 SSX2IPQ9Y2D8 614 aa17.48■□□□□ 0.39
TRAPPC11-204ENST00000505676 A0A087X1B8 175 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 ILVBLA1L0T0 632 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 URODP06132 367 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 MYL2P10916 166 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 HMGA1P17096 107 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 CD86P42081 329 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 CD151P48509 253 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 POU4F1Q01851 419 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 GNA12Q03113 381 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 DDX53Q86TM3 631 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 ARRDC2Q8TBH0 407 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 PIWIL2Q8TC59 973 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 STON2Q8WXE9 905 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 THOC1Q96FV9 657 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 TMEM39AQ9NV64 488 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 TMEM216Q9P0N5 145 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 YIPF1Q9Y548 306 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 SCN5AQ14524 2016 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 ADAM12O43184 909 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 VAPBO95292 243 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 CLTBP09497 229 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 RALBP11234 206 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 HNRNPH1P31943 449 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 SLC1A6P48664 564 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 SPOUT1Q5T280 376 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 MTDHQ86UE4 582 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 TSPAN17Q96FV3 270 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 VN1R3Q9BXE9 311 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 NMRAL1Q9HBL8 299 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 SPG21Q9NZD8 308 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 IL1RAPL1Q9NZN1 696 aa17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 CORO1CQ9ULV4 474 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 ARIH1Q9Y4X5 557 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-204ENST00000505676 LTBP2Q14767 1821 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 A0A1B0GVM2 712 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 TCAF2A6NFQ2 919 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 UPP2O95045 317 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms