RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CTDSP2O14595 271 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 LIASO43766 372 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 FAM20BO75063 409 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SERPINC1P01008 464 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 ENO1P06733 434 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 CDK4P11802 303 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 TMEM11P17152 192 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 ENGP17813 658 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 CYP2C18P33260 490 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 PTGS2P35354 604 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 FOLR3P41439 243 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 TNNT3P45378 269 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SLC15A1P46059 708 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 NRIP1P48552 1158 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 VPS41P49754 854 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 TFCP2Q12800 502 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 GAB1Q13480 694 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 HIST2H2ACQ16777 129 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 C15orf59Q2T9L4 293 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SERTAD4-AS1Q5TG53 156 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 LAIR1Q6GTX8 287 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SYCE2Q6PIF2 218 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SLC30A9Q6PML9 568 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 TSSK4Q6SA08 328 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 FAM47EQ6ZV65 393 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 CCDC186Q7Z3E2 898 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 RNF144BQ7Z419 303 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 ZNF276Q8N554 614 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SCAIQ8N9R8 606 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 GPR150Q8NGU9 434 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SGCDQ92629 289 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 WDFY2Q96P53 400 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 GCNAQ96QF7 691 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 HEMGNQ9BXL5 484 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 FSD1LQ9BXM9 530 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 MRPL1Q9BYD6 325 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 RETREG1Q9H6L5 497 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SNTG1Q9NSN8 517 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 SERTAD4Q9NUC0 356 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 TMEM248Q9NWD8 314 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 ASNSD1Q9NWL6 643 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 ARL15Q9NXU5 204 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 DLL3Q9NYJ7 618 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 GTF3C4Q9UKN8 822 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 ADAMTS5Q9UNA0 930 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 CCL27Q9Y4X3 112 aa4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 HEMK1Q9Y5R4 338 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-208ENST00000505553 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 A0A1W2PQF6 199 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 UNC119BA6NIH7 251 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 C17orf100A8MU93 164 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 A8MXE2 369 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 VWC2LB2RUY7 222 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 BTBD18B2RXH4 712 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 TAF4O00268 1085 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 CLIC1O00299 241 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 PRYO14603 147 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 NDUFS3O75489 264 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 SEC31AO94979 1220 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 CBX6O95503 412 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 TTLL1O95922 423 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 ADAP00813 363 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 HOXB5P09067 269 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 SELLP14151 372 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 KRT4P19013 534 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 TYK2P29597 1187 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 HOXA13P31271 388 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 ZNF84P51523 738 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 ZNF41P51814 821 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 EEFSECP57772 596 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 C21orf58P58505 322 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 PSMC6P62333 389 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 SLC25A3Q00325 362 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 DMWDQ09019 674 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 BFSP1Q12934 665 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 OLIG2Q13516 323 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 TP53BP2Q13625 1128 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 SEMA3AQ14563 771 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 MFSD13AQ14CX5 517 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 VEPH1Q14D04 833 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 PCLAFQ15004 111 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 TXNRD1Q16881 649 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 ZSCAN23Q3MJ62 389 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 TIGD2Q4W5G0 525 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 C9orf152Q5JTZ5 239 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 ERMARDQ5T6L9 678 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 TMEM268Q5VZI3 342 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 NUGGCQ68CJ6 796 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 ADALQ6DHV7 355 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 JADE1Q6IE81 842 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 CPLX2Q6PUV4 134 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 CRELD2Q6UXH1 353 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 CHST3Q7LGC8 479 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 IQCA1Q86XH1 822 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 OR8H3Q8N146 312 aa4.07□□□□□ -1.76
TRAPPC13-208ENST00000505553 CHCHD4Q8N4Q1 142 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms